RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 BHLHA9Q7RTU4 235 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 TMEM139Q8IV31 216 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 OVCA2Q8WZ82 227 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 IRGQQ8WZA9 623 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 MRPS31Q92665 395 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 NECTIN4Q96NY8 510 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 POMKQ9H5K3 350 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 NMUR1Q9HB89 426 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 TLR8Q9NR97 1041 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 BRWD1Q9NSI6 2320 aa16.4■□□□□ 0.22
PCDHGC3-204ENST00000617222 MYH10P35580 1976 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 GOLGA8SH3BPF8 625 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 CALB1P05937 261 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 CEBPBP17676 345 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 PPP3CCP48454 512 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLC6A3Q01959 620 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 TFF2Q03403 129 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZNF268Q14587 947 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 CBX2Q14781 532 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 TAF5Q15542 800 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 HFE2Q6ZVN8 426 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 GET4Q7L5D6 327 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZDHHC17Q8IUH5 632 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCDC170Q8IYT3 715 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 ARHGAP18Q8N392 663 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 OSER1Q9NX31 292 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 NENFQ9UMX5 172 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 EPN1Q9Y6I3 576 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 NCANO14594 1321 aa16.39■□□□□ 0.21
PCDHGC3-204ENST00000617222 SART1O43290 800 aaKnown RBP16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 GRAP2O75791 330 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 RARGP13631 454 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 PSEN1P49768 467 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 MTF1Q14872 753 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 ARHGAP15Q53QZ3 475 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 EFHC1Q5JVL4 640 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 STXBP5Q5T5C0 1151 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 GPR158Q5T848 1215 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 SNX30Q5VWJ9 437 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 BSPRYQ5W0U4 402 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 BTBD8Q5XKL5 378 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 TXNDC8Q6A555 127 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 RAD9BQ6WBX8 426 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 GOLGA1Q92805 767 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 TRPC7Q9HCX4 862 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 WDR35Q9P2L0 1181 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
PCDHGC3-204ENST00000617222 DOCK6Q96HP0 2047 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 C2orf78A6NCI8 922 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZNF263O14978 683 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 LTFP02788 710 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 RALAP11233 206 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 ABCB4P21439 1286 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 RRM1P23921 792 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 GALCP54803 685 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 HECTD3Q5T447 861 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 FAM102AQ5T9C2 384 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 PTCRAQ6ISU1 281 aaPredicted RBP16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 POTEHQ6S545 545 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 MAB21L3Q8N8X9 362 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 EDEM1Q92611 657 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 KHSRPQ92945 711 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 ZSWIM3Q96MP5 696 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLC46A2Q9BY10 475 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 SLITRK6Q9H5Y7 841 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 TASP1Q9H6P5 420 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 CCSER2Q9H7U1 834 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 ASNSD1Q9NWL6 643 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 NUDT5Q9UKK9 219 aa16.37■□□□□ 0.21
PCDHGC3-204ENST00000617222 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 NDUFA10O95299 355 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 GJB6O95452 261 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 TBX18O95935 607 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 GLI1P08151 1106 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 HDCP19113 662 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 YWHAZP63104 245 aaKnown RBP16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 SPA17Q15506 151 aa16.36■□□□□ 0.21
PCDHGC3-204ENST00000617222 PUS10Q3MIT2 529 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms