RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 PQLC3Q8N755 202 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 PLD5Q8N7P1 536 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 FAM71DQ8N9W8 422 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 SLC2A14Q8TDB8 520 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 RTP4Q96DX8 246 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 C10orf88Q9H8K7 445 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 CTNNAL1Q9UBT7 734 aa16.4■□□□□ 0.22
NR1H3-235ENST00000616973 TSC2P49815 1807 aa16.39■□□□□ 0.22
NR1H3-235ENST00000616973 GABRDO14764 452 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 APOL1O14791 398 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 TSHRP16473 764 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 DRD4P21917 467 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 TM4SF4P48230 202 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FCGRTP55899 365 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 ZC3H12AQ5D1E8 599 aaKnown RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 VSTM1Q6UX27 236 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 NPNTQ6UXI9 565 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FAM105AQ9NUU6 356 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FETUBQ9UGM5 382 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 ZMYND8Q9ULU4 1186 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 CYB561D2O14569 222 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 CA12O43570 354 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 LCP1P13796 627 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FASTKD3Q14CZ7 662 aaKnown RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 ANKRD22Q5VYY1 191 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 STRADAQ7RTN6 431 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 YTHDF3Q7Z739 585 aaKnown RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 SERINC5Q86VE9 423 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 ZBED8Q8IZ13 594 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FUKQ8N0W3 1084 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 CYP4X1Q8N118 509 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 CLEC4CQ8WTT0 213 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 MAML1Q92585 1016 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 USP29Q9HBJ7 922 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 SPC25Q9HBM1 224 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
NR1H3-235ENST00000616973 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
NR1H3-235ENST00000616973 TDRD15B5MCY1 1934 aaKnown RBP16.38■□□□□ 0.21
NR1H3-235ENST00000616973 EXOC1LA0A1B0GW35 172 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 BCLAF3A2AJT9 711 aaKnown RBP16.38■□□□□ 0.21
NR1H3-235ENST00000616973 TOMM70O94826 608 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
NR1H3-235ENST00000616973 GCAP28676 217 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
NR1H3-235ENST00000616973 SLC8A3P57103 927 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 PPARDQ03181 441 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 CA9Q16790 459 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 C6orf89Q6UWU4 347 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 CXCL17Q6UXB2 119 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 PCDH19Q8TAB3 1148 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 KCTD13Q8WZ19 329 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 TRIB2Q92519 343 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 TSPYL2Q9H2G4 693 aaPredicted RBP16.38■□□□□ 0.21
NR1H3-235ENST00000616973 SLC24A2Q9UI40 661 aa16.38■□□□□ 0.21
NR1H3-235ENST00000616973 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 H7C0C1 242 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 ZFXP17010 805 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-235ENST00000616973 L1CAMP32004 1257 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 ATP5OP48047 213 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 BCAR1P56945 870 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 MGAT3Q09327 533 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 QPCTQ16769 361 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 C1orf228Q6PIY5 440 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 ZC3H18Q86VM9 953 aaKnown RBP16.37■□□□□ 0.21
NR1H3-235ENST00000616973 TMEM86AQ8N2M4 240 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 GSTCDQ8NEC7 633 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 PRDM16Q9HAZ2 1276 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 UBN1Q9NPG3 1134 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 PAK5Q9P286 719 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 DDX20Q9UHI6 824 aaKnown RBP16.37■□□□□ 0.21
NR1H3-235ENST00000616973 CHADO15335 359 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 SEPT4O43236 478 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 DAB1O75553 588 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 CHRNA1P02708 482 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 BRAFP15056 766 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 TFE3P19532 575 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-235ENST00000616973 PHBP35232 272 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 MATKP42679 507 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 XRCC4Q13426 336 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 FNBP1LQ5T0N5 605 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
NR1H3-235ENST00000616973 WSCD1Q658N2 575 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 C4orf22Q6V702 233 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
NR1H3-235ENST00000616973 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms