RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 ARHGAP20Q9P2F6 1191 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 DMGDHQ9UI17 866 aaKnown RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 ENDOD1O94919 500 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 CRTAMO95727 393 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 GSNP06396 782 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 RHOCP08134 193 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 MPP3Q13368 585 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 CDKAL1Q5VV42 579 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 PAPD7Q5XG87 772 aaKnown RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 KRT78Q8N1N4 520 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 YME1L1Q96TA2 773 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 TECPR2O15040 1411 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 RNASEH1O60930 286 aaKnown RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 RBP1P09455 135 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 ANXA11P50995 505 aaKnown RBP18.29■□□□□ 0.52
ATXN2-227ENST00000616825 RHOAP61586 193 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 ILDR2Q71H61 639 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 V9GYQ6 96 aa18.29■□□□□ 0.52
ATXN2-227ENST00000616825 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
ATXN2-227ENST00000616825 CSDE1O75534 798 aaKnown RBP18.28■□□□□ 0.52
ATXN2-227ENST00000616825 IL1R1P14778 569 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 KCNA3P22001 575 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 TKTL1P51854 596 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 BTKQ06187 659 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 NLRP9Q7RTR0 991 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 MYO1HQ8N1T3 1032 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 PHTF1Q9UMS5 762 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 MAP3K7CLP57077 242 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 PRKCQQ04759 706 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 JADE3Q92613 823 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 TMEM245Q9H330 911 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 ASB7Q9H672 318 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 NCKIPSDQ9NZQ3 722 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 SPACA6W5XKT8 324 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 GUCA1CO95843 209 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 CAMK2GQ13555 558 aaPredicted RBP18.28■□□□□ 0.52
ATXN2-227ENST00000616825 RETSATQ6NUM9 610 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 ZNF606Q8WXB4 792 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 ZFP42Q96MM3 310 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 CIPCQ9C0C6 399 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 RBM22Q9NW64 420 aaKnown RBP eCLIP18.28■□□□□ 0.526e-11■■■■■ 45.7
ATXN2-227ENST00000616825 RUVBL2Q9Y230 463 aaKnown RBP18.28■□□□□ 0.52
ATXN2-227ENST00000616825 MAPTP10636 758 aaKnown RBP18.28■□□□□ 0.52
ATXN2-227ENST00000616825 GPC1P35052 558 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 NFIL3Q16649 462 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 DAB2IPQ5VWQ8 1189 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 OVOS1Q6IE37 1185 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 CPB2Q96IY4 423 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 SYT15Q9BQS2 421 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 KANSL3Q9P2N6 904 aa18.28■□□□□ 0.52
ATXN2-227ENST00000616825 GRK2P25098 689 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 DSG3P32926 999 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 KPNA1P52294 538 aaPredicted RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CSTF3Q12996 717 aaKnown RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 TRIM69Q86WT6 500 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 ZMAT2Q96NC0 199 aaKnown RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 TBCBQ99426 244 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 ADGRE3Q9BY15 652 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.27■□□□□ 0.524e-7■■□□□ 14.3
ATXN2-227ENST00000616825 IMPDH2P12268 514 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 MLNP12872 115 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CNTFP26441 200 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 GLRBP48167 497 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 PMS1P54277 932 aaKnown RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 PSMC6P62333 389 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CNTN1Q12860 1018 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CDC16Q13042 620 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 PKN1Q16512 942 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 TRIM60Q495X7 471 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CCT7Q99832 543 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CDC42EP4Q9H3Q1 356 aaKnown RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 INTS13Q9NVM9 706 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 RRN3Q9NYV6 651 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 DPP7Q9UHL4 492 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 LNPEPQ9UIQ6 1025 aa18.27■□□□□ 0.52
ATXN2-227ENST00000616825 BARX2Q9UMQ3 279 aaPredicted RBP18.27■□□□□ 0.52
ATXN2-227ENST00000616825 CCR1P32246 355 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 EPHB3P54753 998 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 MRPS15P82914 257 aaKnown RBP18.27■□□□□ 0.51
ATXN2-227ENST00000616825 UBE3AQ05086 875 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 MARC1Q5VT66 337 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 STRA8Q7Z7C7 330 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 CCDC33Q8N5R6 958 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 SLC20A1Q8WUM9 679 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 SPIRE2Q8WWL2 714 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 KAT2BQ92831 832 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 IARS2Q9NSE4 1012 aaKnown RBP18.27■□□□□ 0.51
ATXN2-227ENST00000616825 SLC24A2Q9UI40 661 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 ITGA11Q9UKX5 1188 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 ATP11BQ9Y2G3 1177 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms