RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MTAPQ13126 283 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 FAM124AQ86V42 546 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 TRAPPC5Q8IUR0 188 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SLC35F6Q8N357 371 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 CDC25AP30304 524 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 SH3GL1Q99961 368 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 MLXIPLQ9NP71 852 aa13.03□□□□□ -0.32
TCF4-248ENST00000616053 CCNG1P51959 295 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 CCINQ13939 588 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 USP17L6PQ6QN14 398 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 C16orf89Q6UX73 402 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 PI16Q6UXB8 463 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 PSME2Q9UL46 239 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 NUP160Q12769 1436 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 POLBP06746 335 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 PIK3R1P27986 724 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 CHRNA5P30532 468 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.32
TCF4-248ENST00000616053 SLC7A5Q01650 507 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 OR8H2Q8N162 312 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 IFT52Q9Y366 437 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 CFAP73A6NFT4 308 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 KPNA6O60684 536 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.32
TCF4-248ENST00000616053 CNDP1Q96KN2 507 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 NPHS2Q9NP85 383 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 TBX22Q9Y458 520 aa13.02□□□□□ -0.32
TCF4-248ENST00000616053 CASRP41180 1078 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PTSQ03393 145 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 IKBKEQ14164 716 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 TKFCQ3LXA3 575 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 NAPEPLDQ6IQ20 393 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 KLHL35Q6PF15 583 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 ANKMY2Q8IV38 441 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 DAW1Q8N136 415 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 RAB6BQ9NRW1 208 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 H3BNH8 94 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 RPL4P36578 427 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 BOP1Q14137 746 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 CASP12Q6UXS9 341 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 IKBIPQ70UQ0 350 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 SUGP1Q8IWZ8 645 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 SLC9A6Q92581 669 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 MLPHQ9BV36 600 aaPredicted RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 ITPKBP27987 946 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 SPRP35270 261 aaPredicted RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 SMCO1Q147U7 214 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 OR10G6Q8NH81 332 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PAIP1Q9H074 479 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 ADAM7Q9H2U9 754 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 KCTD10Q9H3F6 313 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 MRPS23Q9Y3D9 190 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 AOX1Q06278 1338 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 USP1O94782 785 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 CRTAMO95727 393 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 CYB5AP00167 134 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 MECP2P51608 486 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 CBWD3Q5JTY5 395 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 CBWD5Q5RIA9 395 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 SPTLC3Q9NUV7 552 aa13.02□□□□□ -0.33
TCF4-248ENST00000616053 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
TCF4-248ENST00000616053 STX16-NPEPL1H3BU86 382 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 STX16O14662 325 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CCNT2O60583 730 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 BCAP31P51572 246 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 DLG1Q12959 904 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CCDC184Q52MB2 194 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 ATF7IP2Q5U623 682 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 SNX21Q969T3 373 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 FAM136AQ96C01 138 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 MRGBPQ9NV56 204 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 UXTQ9UBK9 157 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 URADA6NGE7 173 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 WRBO00258 174 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 XPO1O14980 1071 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 MTSS1O43312 755 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 GFPT1Q06210 699 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 REPS1Q96D71 796 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 TINF2Q9BSI4 451 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 ALG13Q9NP73 1137 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms