RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 ADAM32Q8TC27 787 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 SGF29Q96ES7 293 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 RIT2Q99578 217 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 AVENQ9NQS1 362 aaPredicted RBP12.22□□□□□ -0.45
CDH5-208ENST00000614547 ARHGAP26Q9UNA1 814 aa12.22□□□□□ -0.45
CDH5-208ENST00000614547 CLUHO75153 1309 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 hCG_1818297A0A087WSY0 165 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 RARBP10826 455 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 VCLP18206 1134 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 GMPRP36959 345 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 CDK7P50613 346 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 HADHBP55084 474 aaKnown RBP12.21□□□□□ -0.45
CDH5-208ENST00000614547 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
CDH5-208ENST00000614547 FOLH1Q04609 750 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 SLC9A9Q8IVB4 645 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 JOSD2Q8TAC2 188 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 DENND1AQ8TEH3 1009 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 NAT14Q8WUY8 206 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 SYT11Q9BT88 431 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 MYH11P35749 1972 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 NUP188Q5SRE5 1749 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 SOCS7O14512 581 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 NCKAP1LP55160 1127 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 ADARP55265 1226 aaKnown RBP12.21□□□□□ -0.45
CDH5-208ENST00000614547 DPYSL3Q14195 570 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 PDPK2PQ6A1A2 396 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 CDHR3Q6ZTQ4 885 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 SIKE1Q9BRV8 207 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 FAM49BQ9NUQ9 324 aa12.21□□□□□ -0.45
CDH5-208ENST00000614547 HERC5Q9UII4 1024 aaKnown RBP12.21□□□□□ -0.45
CDH5-208ENST00000614547 PHLPP1O60346 1717 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 GAKO14976 1311 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 C15orf38-AP3S2A0A0A6YYH1 394 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 ATP9BO43861 1147 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 TYROBPO43914 113 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 GLRBP48167 497 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 BAATQ14032 418 aaPredicted RBP12.21□□□□□ -0.46
CDH5-208ENST00000614547 C11orf91Q3C1V1 193 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 EFHC2Q5JST6 749 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 C1orf220Q5T0J3 134 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 ARPINQ7Z6K5 226 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 MCF2L2Q86YR7 1114 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 IGDCC3Q8IVU1 814 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.46
CDH5-208ENST00000614547 BANPQ8N9N5 519 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 TMEM161BQ8NDZ6 487 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.46
CDH5-208ENST00000614547 DIS3LQ8TF46 1054 aaKnown RBP12.21□□□□□ -0.46
CDH5-208ENST00000614547 SLC26A4O43511 780 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 FKBP6O75344 327 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 ATP6V1G1O75348 118 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TM7SF2O76062 418 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 EEF1B2P24534 225 aaKnown RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 KLRC2P26717 231 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 PPIDQ08752 370 aaKnown RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 C16orf72Q14CZ0 275 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 NET1Q7Z628 596 aaPredicted RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 LIN28AQ9H9Z2 209 aaKnown RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 ATXN10Q9UBB4 475 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 ARHGAP10A1A4S6 786 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 ABLIM1O14639 778 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 RBL1P28749 1068 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 RNF135Q8IUD6 432 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TNS4Q8IZW8 715 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 CDRT15Q96T59 188 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 ZNF536O15090 1300 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 GOLGA8TH3BQL2 631 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 GPC4O75487 556 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TBXAS1P24557 533 aaPredicted RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 SLC1A6P48664 564 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 GTF2A2P52657 109 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 CHN2P52757 468 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 JAG1P78504 1218 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 PRKCEQ02156 737 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 GCNT1Q02742 428 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 SEPT6Q14141 434 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 TFDP2Q14188 446 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 PDK1Q15118 436 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 C15orf59Q2T9L4 293 aaPredicted RBP12.2□□□□□ -0.46
CDH5-208ENST00000614547 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
CDH5-208ENST00000614547 FIZ1Q96SL8 496 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms