RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CBWD1Q9BRT8 395 aa18.3■□□□□ 0.52
CSNK1E-215ENST00000612795 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
CSNK1E-215ENST00000612795 ELOVL4Q9GZR5 314 aa18.3■□□□□ 0.52
CSNK1E-215ENST00000612795 SNX25Q9H3E2 840 aa18.3■□□□□ 0.52
CSNK1E-215ENST00000612795 INTS13Q9NVM9 706 aa18.3■□□□□ 0.52
CSNK1E-215ENST00000612795 A0A1W2PQF6 199 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 YWHAQP27348 245 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 GRIK2Q13002 908 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 WDR45BQ5MNZ6 344 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 EGFLAMQ63HQ2 1017 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 BBS7Q8IWZ6 715 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 GPD1LQ8N335 351 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 IPO4Q8TEX9 1081 aaKnown RBP18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 FOXJ1Q92949 421 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 SPHK2Q9NRA0 654 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 RAXQ9Y2V3 346 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
CSNK1E-215ENST00000612795 CELSR3Q9NYQ7 3312 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 PTPRJQ12913 1337 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 MEI4A8MW99 385 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 COCHO43405 550 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 IRF1P10914 325 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 CACNA2D1P54289 1103 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 ALCAMQ13740 583 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 GRAMD4Q6IC98 578 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 KIAA1324Q6UXG2 1013 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 TOGARAM2Q6ZUX3 1019 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 LIMS2Q7Z4I7 341 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 OR5B17Q8NGF7 314 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 OR6B3Q8NGW1 331 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 LRIG1Q96JA1 1093 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 ZFRQ96KR1 1074 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 ZDHHC5Q9C0B5 715 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 NACA2Q9H009 215 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 DNAJC17Q9NVM6 304 aaKnown RBP18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 STK17AQ9UEE5 414 aa18.28■□□□□ 0.52
CSNK1E-215ENST00000612795 TMEM131Q92545 1883 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 PRPF6O94906 941 aaKnown RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 RTN3O95197 1032 aaPredicted RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 GNL1P36915 607 aaPredicted RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 CASP5P51878 434 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 SURF1Q15526 300 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 DUOXA2Q1HG44 320 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 HECTD3Q5T447 861 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 TMEM25Q86YD3 366 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 NUP93Q8N1F7 819 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 SETD7Q8WTS6 366 aaKnown RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 SCFD1Q8WVM8 642 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 ZNF419Q96HQ0 510 aaPredicted RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 ACOX2Q99424 681 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 MRPL45Q9BRJ2 306 aaKnown RBP18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 ZNF518BQ9C0D4 1074 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 CD93Q9NPY3 652 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 STARD13Q9Y3M8 1113 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 SHROOM3Q8TF72 1996 aa18.27■□□□□ 0.52
CSNK1E-215ENST00000612795 TRIM24O15164 1050 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 IDEP14735 1019 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 MAOBP27338 520 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 TNNC1P63316 161 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 XPO6Q96QU8 1125 aaKnown RBP18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 SLC6A17Q9H1V8 727 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 SCUBE2Q9NQ36 999 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 OLFML3Q9NRN5 406 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 TMEM30AQ9NV96 361 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 PCOLCE2Q9UKZ9 415 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 HCN2Q9UL51 889 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 RAD54BQ9Y620 910 aa18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 GOLGA4Q13439 2230 aaKnown RBP18.26■□□□□ 0.51
CSNK1E-215ENST00000612795 URB1O60287 2271 aaKnown RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 TP53BP1Q12888 1972 aaPredicted RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 A0A1B0GTW7 788 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 ZNF233A6NK53 670 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 NEDD8-MDP1E9PL57 170 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 KIAA0391O15091 583 aaKnown RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 PTPN1P18031 435 aaKnown RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 GJB2P29033 226 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 SV2BQ7L1I2 683 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 GLRX5Q86SX6 157 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 SLCO6A1Q86UG4 719 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 WDR49Q8IV35 697 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 ZCCHC9Q8N567 271 aaKnown RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 COL26A1Q96A83 441 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 EPSTI1Q96J88 318 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 MRGPRX1Q96LB2 322 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 BBC3Q96PG8 261 aaPredicted RBP18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 GABRG3Q99928 467 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 DPEP3Q9H4B8 488 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 CCSER2Q9H7U1 834 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 NME7Q9Y5B8 376 aa18.25■□□□□ 0.51
CSNK1E-215ENST00000612795 ATP8B3O60423 1300 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 A8MXQ7 604 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CLDN5O00501 218 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 TACC1O75410 805 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 ZIC2O95409 532 aaPredicted RBP18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CER1O95813 267 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CD6P30203 668 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms