RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 PMS2CLQ68D20 193 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 TMEM92Q6UXU6 159 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 ALLCQ8N6M5 410 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 IL17RCQ8NAC3 791 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 ZMIZ2Q8NF64 920 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 MDGA1Q8NFP4 955 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 SMOQ99835 787 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 CSNK1G1Q9HCP0 422 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 ARHGEF4Q9NR80 690 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 HMGXB4Q9UGU5 601 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 INVSQ9Y283 1065 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 FRMD4BQ9Y2L6 1034 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 SH3BP1Q9Y3L3 701 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 NUP205Q92621 2012 aa18.82■□□□□ 0.6
SSBP1-215ENST00000612337 MAP1BP46821 2468 aaKnown RBP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 THADAQ6YHU6 1953 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 MAPK13O15264 365 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 CALUO43852 315 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 BEST1O76090 585 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 ALDH1A2O94788 518 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 HNRNPLP14866 589 aaKnown RBP eCLIP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 TNFRSF4P43489 277 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 KIR2DL1P43626 348 aaPredicted RBP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 ASPAP45381 313 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 ORC1Q13415 861 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 C1orf220Q5T0J3 134 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 CEP135Q66GS9 1140 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 TCEAL6Q6IPX3 200 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 SPOPLQ6IQ16 392 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 TXNDC5Q8NBS9 432 aaKnown RBP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 TCEAL3Q969E4 200 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 FBXO44Q9H4M3 255 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 TRAF3IP3Q9Y228 551 aa18.81■□□□□ 0.6
SSBP1-215ENST00000612337 MYO18AQ92614 2054 aaKnown RBP18.81■□□□□ 0.6
SSBP1-215ENST00000612337 SGK1O00141 431 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 HOXC11O43248 304 aaPredicted RBP18.8■□□□□ 0.6
SSBP1-215ENST00000612337 TLR5O60602 858 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 KIF20AO95235 890 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 KLF8O95600 359 aaPredicted RBP18.8■□□□□ 0.6
SSBP1-215ENST00000612337 HLA-DRAP01903 254 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 TRIM21P19474 475 aaKnown RBP18.8■□□□□ 0.6
SSBP1-215ENST00000612337 TIE1P35590 1138 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 PIK3CAP42336 1068 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 KDSRQ06136 332 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 EOGTQ5NDL2 527 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 BBS7Q8IWZ6 715 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 ETFBKMTQ8IXQ9 262 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 PHTF2Q8N3S3 785 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 C12orf29Q8N999 325 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 OLIG1Q8TAK6 271 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 SPATA32Q96LK8 384 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 NACA2Q9H009 215 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 CEP295Q9C0D2 2601 aa18.8■□□□□ 0.6
SSBP1-215ENST00000612337 FAM237AA0A1B0GTK4 181 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 RHOBTB3O94955 611 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 FAM200BP0CF97 657 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 BCKDHBP21953 392 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 SYKP43405 635 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 PGFP49763 221 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 VAMP7P51809 220 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 INCA1Q0VD86 236 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 NFIL3Q16649 462 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 PREPLQ4J6C6 727 aaPredicted RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 BTBD8Q5XKL5 378 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 TTC30AQ86WT1 665 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 WBP2Q969T9 261 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 CCDC47Q96A33 483 aaKnown RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 HNRNPABQ99729 332 aaKnown RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 EDEM2Q9BV94 578 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 LSM14BQ9BX40 385 aaKnown RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 POLMQ9NP87 494 aaPredicted RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
SSBP1-215ENST00000612337 SPHK2Q9NRA0 654 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
SSBP1-215ENST00000612337 ADAM23O75077 832 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 TULP3O75386 442 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 IRF1P10914 325 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 NR2F2P24468 414 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 KRT85P78386 507 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 HTR3DQ70Z44 454 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 INTS8Q75QN2 995 aaKnown RBP18.78■□□□□ 0.6
SSBP1-215ENST00000612337 NAT16Q8N8M0 369 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 KCNV2Q8TDN2 545 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 WHAMMQ8TF30 809 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 CYP3A43Q9HB55 503 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 DEC1Q9P2X7 70 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 SCML2Q9UQR0 700 aa18.78■□□□□ 0.6
SSBP1-215ENST00000612337 TBC1D3BA6NDS4 549 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 TBX18O95935 607 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 PRR29P0C7W0 189 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 ADORA2BP29275 332 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 P2RY2P41231 377 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 NDUFA8P51970 172 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 ENPEPQ07075 957 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms