RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 USP29Q9HBJ7 922 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PCDH18Q9HCL0 1135 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 A8MXQ7 604 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PAPSS1O43252 624 aaPredicted RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 HCRTO43612 131 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 ZWINTO95229 277 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 MT-ND3P03897 115 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 MMP3P08254 477 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PDGFRBP09619 1106 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 SETDB1Q15047 1291 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PCDH19Q8TAB3 1148 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 TCP10LQ8TDR4 215 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 CFAP36Q96G28 342 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 SLC4A5Q9BY07 1137 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 CDHR5Q9HBB8 845 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 TRIM33Q9UPN9 1127 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 TCRBV9S1A1TA0A576 114 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 EDF1O60869 148 aaKnown RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 ATP6V1G2O95670 118 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 ACVR2BQ13705 512 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 DGKDQ16760 1214 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 SWT1Q5T5J6 900 aaKnown RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 VSIG1Q86XK7 387 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PQLC3Q8N755 202 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 OSMRQ99650 979 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 DHRS4Q9BTZ2 278 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 GCOM2Q9BZD3 368 aaPredicted RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 ALG13Q9NP73 1137 aaKnown RBP16.61■□□□□ 0.25
TRIM46-211ENST00000611379 PAK5Q9P286 719 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 STK38LQ9Y2H1 464 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 NME7Q9Y5B8 376 aa16.61■□□□□ 0.25
TRIM46-211ENST00000611379 STRNO43815 780 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 INHBAP08476 426 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 TFE3P19532 575 aaPredicted RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 TMEM110Q86TL2 294 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 SESTD1Q86VW0 696 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 BEST2Q8NFU1 509 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 KHSRPQ92945 711 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 PLEKHA5Q9HAU0 1116 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 NOD2Q9HC29 1040 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 APRTP07741 180 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 AKAP5P24588 427 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 ADORA2BP29275 332 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 PTK7Q13308 1070 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 E2F5Q15329 346 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 PKDCCQ504Y2 493 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 RGS9BPQ6ZS82 235 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 CTAGE3PQ8IX95 158 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 CCDC33Q8N5R6 958 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 ERP27Q96DN0 273 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 FAM124BQ9H5Z6 455 aaPredicted RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 USH1CQ9Y6N9 552 aa16.6■□□□□ 0.25
TRIM46-211ENST00000611379 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
TRIM46-211ENST00000611379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 GABBR2O75899 941 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 FGFR1P11362 822 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 ALDH3A1P30838 453 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CCL15Q16663 113 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 TBC1D31Q96DN5 1066 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 LRRC37BQ96QE4 947 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 DHX35Q9H5Z1 703 aaKnown RBP16.59■□□□□ 0.25
TRIM46-211ENST00000611379 SLC17A7Q9P2U7 560 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 TEX264Q9Y6I9 313 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 DPYSL4O14531 572 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CHADO15335 359 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 LCP1P13796 627 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 TGM2P21980 687 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
TRIM46-211ENST00000611379 HDAC4P56524 1084 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 SNX16P57768 344 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 ANKLE1Q8NAG6 615 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CCDC110Q8TBZ0 833 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 SNX27Q96L92 541 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 MYLK2Q9H1R3 596 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
TRIM46-211ENST00000611379 SSU72Q9NP77 194 aaKnown RBP16.59■□□□□ 0.25
TRIM46-211ENST00000611379 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 CCDC130P13994 396 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 FAAP100Q0VG06 881 aa16.59■□□□□ 0.25
TRIM46-211ENST00000611379 SOWAHAQ2M3V2 549 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms