RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 RUNDC3BQ96NL0 473 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 SAMD11Q96NU1 681 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 C11orf84Q9BUA3 381 aaPredicted RBP23.32■■□□□ 1.32
UBE3C-209ENST00000611269 RHOBTB2Q9BYZ6 727 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 KRT82Q9NSB4 513 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CYTH4Q9UIA0 394 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 LZTS1Q9Y250 596 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 PSTPIP1O43586 416 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CTSAP10619 480 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 PPP2R2DQ66LE6 453 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 SLC8B1Q6J4K2 584 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 RHOT1Q8IXI2 618 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 C12orf50Q8NA57 414 aaPredicted RBP23.32■■□□□ 1.32
UBE3C-209ENST00000611269 TSEN2Q8NCE0 465 aaKnown RBP23.32■■□□□ 1.32
UBE3C-209ENST00000611269 POF1BQ8WVV4 589 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 PGLYRP2Q96PD5 576 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CLSTN3Q9BQT9 956 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CERS4Q9HA82 394 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CDH23Q9H251 3354 aa23.32■■□□□ 1.32
UBE3C-209ENST00000611269 CSPG5O95196 566 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 DNAJB1P25685 340 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 OR1D2P34982 312 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 GGCXP38435 758 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 PTGIRP43119 386 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 BCAT1P54687 386 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 DRG2P55039 364 aaKnown RBP23.31■■□□□ 1.32
UBE3C-209ENST00000611269 SIX1Q15475 284 aaPredicted RBP23.31■■□□□ 1.32
UBE3C-209ENST00000611269 PPP1R15BQ5SWA1 713 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 C4orf50Q6ZRC1 276 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 TMC7Q7Z402 723 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 SPATA2LQ8IUW3 424 aaPredicted RBP23.31■■□□□ 1.32
UBE3C-209ENST00000611269 MAGOHBQ96A72 148 aaKnown RBP23.31■■□□□ 1.32
UBE3C-209ENST00000611269 DUSP16Q9BY84 665 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 STRIP2Q9ULQ0 834 aa23.31■■□□□ 1.32
UBE3C-209ENST00000611269 TULP2O00295 520 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 RARAP10276 462 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 BDNFP23560 247 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 CA8P35219 290 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 ERVFC1P60507 584 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 PDE4CQ08493 712 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 BST2Q10589 180 aaKnown RBP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 GPR17Q13304 367 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 HLTFQ14527 1009 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 NFE2Q16621 373 aaPredicted RBP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 MAIP1Q8WWC4 291 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 SMARCD1Q96GM5 515 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 TCF25Q9BQ70 676 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 ERP44Q9BS26 406 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 ABI2Q9NYB9 513 aaPredicted RBP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 DAPK3O43293 454 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 LILRB3O75022 631 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 BEST1O76090 585 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 FAM200BP0CF97 657 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 NPR3P17342 541 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 HSPA9P38646 679 aaKnown RBP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 CACNA2D1P54289 1103 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 ROR1Q01973 937 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 DUPD1Q68J44 220 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 CLEC20AQ6ZU45 233 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 DDX42Q86XP3 938 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBE3C-209ENST00000611269 LRRC19Q9H756 370 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 SLC28A3Q9HAS3 691 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 ENTPD7Q9NQZ7 604 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 TMEM30AQ9NV96 361 aa23.3■■□□□ 1.32
UBE3C-209ENST00000611269 TCRBV7S2A1N4TA0A589 114 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 WDR27A2RRH5 827 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 GRM6O15303 877 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 AP1G2O75843 785 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 UBE3AQ05086 875 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 PDCLQ13371 301 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 DNAJC24Q6P3W2 148 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 RNF19BQ6ZMZ0 732 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 JAMLQ86YT9 394 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 GPR65Q8IYL9 337 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 KATNAL2Q8IYT4 538 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 IQCKQ8N0W5 287 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 C3orf20Q8ND61 904 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 SLC35F5Q8WV83 523 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 TLR9Q9NR96 1032 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 RASAL2Q9UJF2 1139 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 SSX2IPQ9Y2D8 614 aa23.29■■□□□ 1.32
UBE3C-209ENST00000611269 HSF2BPO75031 334 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 CXCL14O95715 111 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 COILP38432 576 aaPredicted RBP23.28■■□□□ 1.32
UBE3C-209ENST00000611269 FNTAP49354 379 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 RPL7AP62424 266 aaKnown RBP23.28■■□□□ 1.32
UBE3C-209ENST00000611269 PMF1Q6P1K2 205 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 TTC27Q6P3X3 843 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 ATAD1Q8NBU5 361 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 C18orf8Q96DM3 657 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 CPXM1Q96SM3 734 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 KCNK16Q96T55 309 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 SMOQ99835 787 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.28■■□□□ 1.32
UBE3C-209ENST00000611269 PCDHB5Q9Y5E4 795 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.28■■□□□ 1.32
UBE3C-209ENST00000611269 MTMR11A4FU01 709 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 H3BNC9 293 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 VNN2O95498 520 aa23.28■■□□□ 1.32
UBE3C-209ENST00000611269 SETSIPP0DME0 302 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms