RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PLD5Q8N7P1 536 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 ATP11CQ8NB49 1132 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 B3GALNT2Q8NCR0 500 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 KCTD13Q8WZ19 329 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 CPT1BQ92523 772 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PIWIL1Q96J94 861 aaKnown RBP12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PWWP2AQ96N64 755 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
USP6NL-206ENST00000609853 DUSP16Q9BY84 665 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 PAK5Q9P286 719 aa12.46□□□□□ -0.41
USP6NL-206ENST00000609853 RCOR3Q9P2K3 495 aaPredicted RBP12.46□□□□□ -0.41
USP6NL-206ENST00000609853 BCLAF3A2AJT9 711 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 PIK3R2O00459 728 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 GABRDO14764 452 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CHADO15335 359 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CA12O43570 354 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ZNF189O75820 626 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 GABBR2O75899 941 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CYBAP13498 195 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CCDC130P13994 396 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 IL4RP24394 825 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 LMO2P25791 158 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ADORA2BP29275 332 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 TM4SF4P48230 202 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 LHX1P48742 406 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 GDF10P55107 478 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 HDAC4P56524 1084 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 SOX4Q06945 474 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 PDIA2Q13087 525 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CRHR2Q13324 411 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 UNC45BQ8IWX7 931 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ZBED8Q8IZ13 594 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ZNF784Q8NCA9 323 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 SLC2A14Q8TDB8 520 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 SNRNP25Q9BV90 132 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 NSRP1Q9H0G5 558 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 RABEP2Q9H5N1 569 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ZMYND8Q9ULU4 1186 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CDY2AQ9Y6F7 541 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 H7C0C1 242 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CYB561D2O14569 222 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 PTGESO14684 152 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 GPR182O15218 404 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 SPAG6O75602 509 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 DRD4P21917 467 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 RPL9P32969 192 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 MATKP42679 507 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ATP5OP48047 213 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 RNASELQ05823 741 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 KLHL38Q2WGJ6 581 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ARHGEF18Q6ZSZ5 1173 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 SERINC5Q86VE9 423 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 CACNA2D3Q8IZS8 1091 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 PYROXD1Q8WU10 500 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 MAML1Q92585 1016 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-206ENST00000609853 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
USP6NL-206ENST00000609853 TMEM120BA0PK00 339 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 SEPT4O43236 478 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 FBXO21O94952 628 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 THP07101 528 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 RARBP10826 455 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 BRAFP15056 766 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 NPR3P17342 541 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
USP6NL-206ENST00000609853 RAB27AP51159 221 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 NBPF20Q3BBV1 942 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 SLC25A52Q3SY17 297 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
USP6NL-206ENST00000609853 C6orf89Q6UWU4 347 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 VSTM1Q6UX27 236 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 CDKL3Q8IVW4 592 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-206ENST00000609853 CCDC13Q8IYE1 715 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 PQLC3Q8N755 202 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 PCDH19Q8TAB3 1148 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 PPP1R13LQ8WUF5 828 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 DYDC1Q8WWB3 177 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 SGSM3Q96HU1 749 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 SEC16BQ96JE7 1060 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 B3GNT5Q9BYG0 378 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 SENP6Q9GZR1 1112 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-206ENST00000609853 NRDE2Q9H7Z3 1164 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 VPS37BQ9H9H4 285 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 USP29Q9HBJ7 922 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 NKIRAS1Q9NYS0 192 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 DDX20Q9UHI6 824 aaKnown RBP12.44□□□□□ -0.42
USP6NL-206ENST00000609853 CASP8AP2Q9UKL3 1982 aa12.44□□□□□ -0.42
USP6NL-206ENST00000609853 ST3GAL5Q9UNP4 418 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms