RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 DPP3Q9NY33 737 aa9.92□□□□□ -0.82
CTCFL-220ENST00000608858 UTP20O75691 2785 aaKnown RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 NPHP3-ACAD11A0A0J9YXS1 232 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 KLK10O43240 276 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TCF3P15923 654 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TPMTP51580 245 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 MAPK7Q13164 816 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 NFE2Q16621 373 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 BROXQ5VW32 411 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 RINT1Q6NUQ1 792 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 EID2Q8N6I1 236 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TERB1Q8NA31 727 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 C1orf216Q8TAB5 229 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TSC1Q92574 1164 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TTC9Q92623 222 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 BHMTQ93088 406 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 WBP1Q96G27 269 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 CNDP2Q96KP4 475 aaKnown RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 NRSN2Q9GZP1 204 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 DNAJC17Q9NVM6 304 aaKnown RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 CHORDC1Q9UHD1 332 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 SRPK3Q9UPE1 567 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 PCDHB6Q9Y5E3 794 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 HEMK1Q9Y5R4 338 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-220ENST00000608858 TCHHQ07283 1943 aa9.91□□□□□ -0.82
CTCFL-220ENST00000608858 ZNF840PA6NDX5 716 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 IRF1P10914 325 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 GLDCP23378 1020 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 BDNFP23560 247 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 CDC25AP30304 524 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 AFF3P51826 1226 aaKnown RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 TMPRSS3P57727 454 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 SLC7A9P82251 487 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 TBC1D25Q3MII6 688 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 FUT11Q495W5 492 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 PKDCCQ504Y2 493 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 ZPBP2Q6X784 338 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 KDM7AQ6ZMT4 941 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 TPGS1Q6ZTW0 290 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 RUFY3Q7L099 469 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 OSTM1Q86WC4 334 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 TMPRSS6Q8IU80 811 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 BBS7Q8IWZ6 715 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 ETFBKMTQ8IXQ9 262 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 PDCL2Q8N4E4 241 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 CADM4Q8NFZ8 388 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 KCNV2Q8TDN2 545 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 KCNB2Q92953 911 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 NTPCRQ9BSD7 190 aaKnown RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 MKRN2Q9H000 416 aaKnown RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 C6orf106Q9H6K1 298 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 ANKMY1Q9P2S6 941 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 ORC3Q9UBD5 711 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-220ENST00000608858 DNM3Q9UQ16 869 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 STARD13Q9Y3M8 1113 aa9.9□□□□□ -0.82
CTCFL-220ENST00000608858 E2F8A0AVK6 867 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 NEDD8-MDP1E9PL57 170 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 OGTO15294 1046 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 TRAK2O60296 914 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 RFPL3O75679 317 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 PDGFRBP09619 1106 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 PSMA5P28066 241 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 LIG4P49917 911 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 SMTNP53814 917 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 TAF10Q12962 218 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
CTCFL-220ENST00000608858 HIST2H2BCQ6DN03 193 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 GRAMD4Q6IC98 578 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 C1orf186Q6ZWK4 172 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-220ENST00000608858 ZNF248Q8NDW4 579 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 SIPA1Q96FS4 1042 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 PLIN2Q99541 437 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 GABRG3Q99928 467 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 MSTO1Q9BUK6 570 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 NUP58Q9BVL2 599 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 TM9SF3Q9HD45 589 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 SPHK2Q9NRA0 654 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 KCNK4Q9NYG8 393 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 MAGEC2Q9UBF1 373 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-220ENST00000608858 LRWD1Q9UFC0 647 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 L1RE1Q9UN81 338 aa9.89□□□□□ -0.83
CTCFL-220ENST00000608858 SH3BP1Q9Y3L3 701 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms