RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 RAD51CO43502 376 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF189O75820 626 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 F9P00740 461 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LTFP02788 710 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RARAP10276 462 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RALAP11233 206 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BDNFP23560 247 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 KDELR1P24390 212 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PPM1AP35813 382 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ARSEP51690 589 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CLCN6P51797 869 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 EPHB4P54760 987 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 VSNL1P62760 191 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DR1Q01658 176 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NNTQ13423 1086 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TFDP2Q14188 446 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 USP41Q3LFD5 358 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLC8B1Q6J4K2 584 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CCNI2Q6ZMN8 369 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ARHGAP18Q8N392 663 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SPATA17Q96L03 361 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF558Q96NG5 402 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF670Q9BS34 389 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ULBP1Q9BZM6 244 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FBXO44Q9H4M3 255 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IL37Q9NZH6 218 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MTRRQ9UBK8 725 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DMGDHQ9UI17 866 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM92AA1XBS5 289 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 F8W810 466 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CSF2RAP15509 400 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 IL1R2P27930 398 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 COILP38432 576 aaPredicted RBP12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GATMP50440 423 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HDAC4P56524 1084 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RNASE9P60153 205 aaKnown RBP12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CREMQ03060 361 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SCAPQ12770 1279 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MFSD7Q6UXD7 560 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BHLHA9Q7RTU4 235 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CCHCR1Q8TD31 782 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CLEC4CQ8WTT0 213 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FAF2Q96CS3 445 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PKNOX2Q96KN3 472 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DCLK3Q9C098 648 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AAASQ9NRG9 546 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CHST7Q9NS84 486 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TMEM30AQ9NV96 361 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PRKAG2Q9UGJ0 569 aa12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 OBSL1O75147 1896 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ECEL1O95672 775 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GAS8O95995 478 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SOD2P04179 222 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TCF4P15884 667 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ZFXP17010 805 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ITGB8P26012 769 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PSEN1P49768 467 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TAF5Q15542 800 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 C15orf59Q2T9L4 293 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BEND6Q5SZJ8 279 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DAB2IPQ5VWQ8 1189 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AADACL2Q6P093 401 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PSRC1Q6PGN9 363 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KCNT2Q6UVM3 1135 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ZDHHC14Q8IZN3 488 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DEFB106AQ8N104 65 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KCTD6Q8NC69 237 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms