RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 DNAI2Q9GZS0 605 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 KCNH6Q9H252 994 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 EBF3Q9H4W6 596 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 ARIH1Q9Y4X5 557 aaPredicted RBP16.6■□□□□ 0.25
RPS28-203ENST00000600659 WNT6Q9Y6F9 365 aa16.6■□□□□ 0.25
RPS28-203ENST00000600659 ATG2BQ96BY7 2078 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 A0A1W2PQH9 124 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 GREM1O60565 184 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 TBX18O95935 607 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 MBL2P11226 248 aaPredicted RBP16.59■□□□□ 0.25
RPS28-203ENST00000600659 CTHP32929 405 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 EML3Q32P44 896 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 PM20D1Q6GTS8 502 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 SLC35F5Q8WV83 523 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 CLDN23Q96B33 292 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 ULBP1Q9BZM6 244 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
RPS28-203ENST00000600659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPS28-203ENST00000600659 SIT1Q9Y3P8 196 aa16.59■□□□□ 0.25
RPS28-203ENST00000600659 SPECC1L-ADORA2AF8WAN1 911 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 MDM4O15151 490 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 NUBP1P53384 320 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 RUNX3Q13761 415 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 ARHGAP44Q17R89 818 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 GAB4Q2WGN9 574 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 ANO6Q4KMQ2 910 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 PMF1Q6P1K2 205 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 ZNF852Q6ZMS4 543 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 KIAA1958Q8N8K9 716 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 CSGALNACT1Q8TDX6 532 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 KCTD13Q8WZ19 329 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 NDRG1Q92597 394 aaKnown RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 SECISBP2LQ93073 1101 aaKnown RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 NAA15Q9BXJ9 866 aaKnown RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 LINC00597Q9H2U6 94 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 C8orf33Q9H7E9 229 aaPredicted RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 THG1LQ9NWX6 298 aaKnown RBP16.58■□□□□ 0.24
RPS28-203ENST00000600659 FHOD1Q9Y613 1164 aa16.58■□□□□ 0.24
RPS28-203ENST00000600659 FAM170BA6NMN3 283 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 M0QYV0 167 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
RPS28-203ENST00000600659 GPD2P43304 727 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
RPS28-203ENST00000600659 TKTL1P51854 596 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 MFAP3P55082 362 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 ADIGQ0VDE8 80 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 UBXN2BQ14CS0 331 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 STILQ15468 1287 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 ITPRIPL2Q3MIP1 535 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 KLHDC7AQ5VTJ3 777 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 KLHDC10Q6PID8 442 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 RALGPS2Q86X27 583 aaPredicted RBP16.57■□□□□ 0.24
RPS28-203ENST00000600659 ZNF276Q8N554 614 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 DTWD2Q8NBA8 298 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 FAM3CQ92520 227 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 MSANTD3Q96H12 275 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 FAM81BQ96LP2 452 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 KLF16Q9BXK1 252 aaPredicted RBP16.57■□□□□ 0.24
RPS28-203ENST00000600659 VPS16Q9H269 839 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 CFAP97Q9P2B7 532 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
RPS28-203ENST00000600659 CYTH4Q9UIA0 394 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 NUDT5Q9UKK9 219 aa16.57■□□□□ 0.24
RPS28-203ENST00000600659 VPS13AQ96RL7 3174 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 LRRC10BA6NIK2 292 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 MAN2B1O00754 1011 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 CHRNB1P11230 501 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 RARGP13631 454 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 KRT5P13647 590 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 GNA15P30679 374 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 CLCN1P35523 988 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 RGS7P49802 495 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 KLK7P49862 253 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 GAS6Q14393 721 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 MEA1Q16626 185 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 SCML4Q8N228 414 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 ZNF606Q8WXB4 792 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 BPIFA3Q9BQP9 254 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 GANQ9H2C0 597 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 DUS2Q9NX74 493 aaKnown RBP16.56■□□□□ 0.24
RPS28-203ENST00000600659 CLIC5Q9NZA1 410 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 NDRG2Q9UN36 371 aaKnown RBP16.56■□□□□ 0.24
RPS28-203ENST00000600659 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
RPS28-203ENST00000600659 FOXN3O00409 490 aaPredicted RBP16.55■□□□□ 0.24
RPS28-203ENST00000600659 STK25O00506 426 aa16.55■□□□□ 0.24
RPS28-203ENST00000600659 EPHB6O15197 1021 aa16.55■□□□□ 0.24
RPS28-203ENST00000600659 ZBED1O96006 694 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms