RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PARD6AQ9NPB6 346 aa16.7■□□□□ 0.26
VRK3-221ENST00000600284 EBF1Q9UH73 591 aa16.7■□□□□ 0.26
VRK3-221ENST00000600284 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
VRK3-221ENST00000600284 SH3BP1Q9Y3L3 701 aa16.7■□□□□ 0.26
VRK3-221ENST00000600284 DCHS1Q96JQ0 3298 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 HHLA1C9JL84 531 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 K7EQS6 105 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 AXIN1O15169 862 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 TLR5O60602 858 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 CD58P19256 250 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 MRPS21P82921 87 aaKnown RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 GAD2Q05329 585 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 LRRC63Q05C16 580 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 SPEM2Q0P670 501 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 DMC1Q14565 340 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 RSPO4Q2I0M5 234 aaPredicted RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 HSF5Q4G112 596 aaPredicted RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 PREPLQ4J6C6 727 aaPredicted RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 DGLUCYQ7Z3D6 616 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 FAM160A2Q8N612 972 aaPredicted RBP16.69■□□□□ 0.26
VRK3-221ENST00000600284 SEMA4DQ92854 862 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 PNKPQ96T60 521 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 DUSP16Q9BY84 665 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 NACA2Q9H009 215 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 CYLDQ9NQC7 956 aa16.69■□□□□ 0.26
VRK3-221ENST00000600284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.265e-6■■■■■ 65.2
VRK3-221ENST00000600284 APBB3O95704 486 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 ADH5P11766 374 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 HOXC13P31276 330 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 ATP5C1P36542 298 aaKnown RBP16.68■□□□□ 0.26
VRK3-221ENST00000600284 PPP1R2P41236 205 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 PXNP49023 591 aaPredicted RBP16.68■□□□□ 0.26
VRK3-221ENST00000600284 PSEN1P49768 467 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 CSRP2Q16527 193 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 PPP1R26Q5T8A7 1209 aaPredicted RBP16.68■□□□□ 0.26
VRK3-221ENST00000600284 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 KLHDC10Q6PID8 442 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 HTR3DQ70Z44 454 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 ZC3H10Q96K80 434 aaKnown RBP16.68■□□□□ 0.26
VRK3-221ENST00000600284 HEXIM2Q96MH2 286 aaKnown RBP16.68■□□□□ 0.26
VRK3-221ENST00000600284 UBXN6Q9BZV1 441 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 SEMA4GQ9NTN9 838 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 COQ4Q9Y3A0 265 aa16.68■□□□□ 0.26
VRK3-221ENST00000600284 HOXC11O43248 304 aaPredicted RBP16.67■□□□□ 0.26
VRK3-221ENST00000600284 APODP05090 189 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 ACO1P21399 889 aaKnown RBP16.67■□□□□ 0.26
VRK3-221ENST00000600284 GRIA2P42262 883 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 TNFRSF4P43489 277 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 SLC6A11P48066 632 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 KIF11P52732 1056 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 GOLGA8FQ08AF8 430 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 GOLGA8DPQ0D2H9 430 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 STIM1Q13586 685 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 LY6G5CQ5SRR4 150 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 GPRIN1Q7Z2K8 1008 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 CCDC186Q7Z3E2 898 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 TADA2BQ86TJ2 420 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 HHIPQ96QV1 700 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 KLF16Q9BXK1 252 aaPredicted RBP16.67■□□□□ 0.26
VRK3-221ENST00000600284 SPHK2Q9NRA0 654 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 CISHQ9NSE2 258 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 MMP17Q9ULZ9 603 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 USP3Q9Y6I4 520 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 DMXL1Q9Y485 3027 aa16.67■□□□□ 0.26
VRK3-221ENST00000600284 KAT7O95251 611 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 PGFP49763 221 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 C2orf27AQ580R0 203 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 BTBD8Q5XKL5 378 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 ARHGAP17Q68EM7 881 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 NUDT18Q6ZVK8 323 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 BBS7Q8IWZ6 715 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 SLC4A11Q8NBS3 891 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 TSTD1Q8NFU3 115 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 KCNV2Q8TDN2 545 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 DHTKD1Q96HY7 919 aaPredicted RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 CDK5RAP1Q96SZ6 601 aaKnown RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 RTKNQ9BST9 563 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 METTL14Q9HCE5 456 aaKnown RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
VRK3-221ENST00000600284 POLR3BQ9NW08 1133 aaPredicted RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 OSER1Q9NX31 292 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 CLIC5Q9NZA1 410 aa16.66■□□□□ 0.26
VRK3-221ENST00000600284 ARMCX3Q9UH62 379 aaPredicted RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 CDV3Q9UKY7 258 aaKnown RBP16.66■□□□□ 0.26
VRK3-221ENST00000600284 ATG2BQ96BY7 2078 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 PSMA7O14818 248 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
VRK3-221ENST00000600284 PMM2O15305 246 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 CYP26A1O43174 497 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 GREM1O60565 184 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 EPN2O95208 641 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 TBX18O95935 607 aa16.65■□□□□ 0.26
VRK3-221ENST00000600284 RARGP13631 454 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms