RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 SPATA20Q8TB22 786 aa20■□□□□ 0.79
FARP1-229ENST00000600190 FBXO32Q969P5 355 aa20■□□□□ 0.79
FARP1-229ENST00000600190 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
FARP1-229ENST00000600190 KCNK16Q96T55 309 aa20■□□□□ 0.79
FARP1-229ENST00000600190 MED10Q9BTT4 135 aa20■□□□□ 0.79
FARP1-229ENST00000600190 NUP62CLQ9H1M0 184 aa20■□□□□ 0.79
FARP1-229ENST00000600190 FRMD4BQ9Y2L6 1034 aa20■□□□□ 0.79
FARP1-229ENST00000600190 THADAQ6YHU6 1953 aa20■□□□□ 0.79
FARP1-229ENST00000600190 NUP205Q92621 2012 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 PATE3B3GLJ2 98 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 RTN3O95197 1032 aaPredicted RBP19.99■□□□□ 0.79
FARP1-229ENST00000600190 ADH5P11766 374 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 HNRNPLP14866 589 aaKnown RBP eCLIP19.99■□□□□ 0.79
FARP1-229ENST00000600190 ATICP31939 592 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 CASP4P49662 377 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 NOVA1P51513 510 aaKnown RBP19.99■□□□□ 0.79
FARP1-229ENST00000600190 CDH8P55286 799 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 KDSRQ06136 332 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 EMC10Q5UCC4 262 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 DAB2IPQ5VWQ8 1189 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 ISM2Q6H9L7 571 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 CYP2U1Q7Z449 544 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 C12orf40Q86WS4 652 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 C12orf56Q8IXR9 622 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 TRIML1Q8N9V2 468 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 IL17RCQ8NAC3 791 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 PDZD8Q8NEN9 1154 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 RLN3Q8WXF3 142 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 ERCC4Q92889 916 aaPredicted RBP19.99■□□□□ 0.79
FARP1-229ENST00000600190 GZF1Q9H116 711 aaPredicted RBP19.99■□□□□ 0.79
FARP1-229ENST00000600190 XYLT2Q9H1B5 865 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 ZDHHC4Q9NPG8 344 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 ARHGEF4Q9NR80 690 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 KIAA1468Q9P260 1216 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 TBC1D14Q9P2M4 693 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 USP24Q9UPU5 2620 aa19.99■□□□□ 0.79
FARP1-229ENST00000600190 SGK1O00141 431 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 PSMA7O14818 248 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 MAP3K13O43283 966 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 COCHO43405 550 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 STAU1O95793 577 aaKnown RBP19.98■□□□□ 0.79
FARP1-229ENST00000600190 EIF2DP41214 584 aaKnown RBP19.98■□□□□ 0.79
FARP1-229ENST00000600190 SHC2P98077 582 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 BIRC3Q13489 604 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 SCAMP5Q8TAC9 235 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 PIGKQ92643 395 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 POLMQ9NP87 494 aaPredicted RBP19.98■□□□□ 0.79
FARP1-229ENST00000600190 BCCIPQ9P287 314 aaKnown RBP eCLIP19.98■□□□□ 0.79
FARP1-229ENST00000600190 TRAF3IP3Q9Y228 551 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 MYOFQ9NZM1 2061 aa19.98■□□□□ 0.79
FARP1-229ENST00000600190 E2F8A0AVK6 867 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 GIPC1O14908 333 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 GRIA2P42262 883 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 ZNF699Q32M78 642 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 COBLL1Q53SF7 1204 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 EOGTQ5NDL2 527 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 LY6G5CQ5SRR4 150 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 HECTD3Q5T447 861 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 PGBD3Q8N328 593 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 NAT16Q8N8M0 369 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 OLIG1Q8TAK6 271 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 WHAMMQ8TF30 809 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 OVCA2Q8WZ82 227 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 ELMO3Q96BJ8 720 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 KCTD10Q9H3F6 313 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 TMEM9BQ9NQ34 198 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 MAN1B1Q9UKM7 699 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 SH3BP1Q9Y3L3 701 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 ATP8B3O60423 1300 aa19.97■□□□□ 0.79
FARP1-229ENST00000600190 A0A0A0MRY4 1105 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.96■□□□□ 0.79
FARP1-229ENST00000600190 BIN1O00499 593 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 PRCPP42785 496 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 TNFRSF4P43489 277 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 KIR2DL1P43626 348 aaPredicted RBP19.96■□□□□ 0.79
FARP1-229ENST00000600190 IRX4P78413 519 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 GAD2Q05329 585 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 ADAM9Q13443 819 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 HSF5Q4G112 596 aaPredicted RBP19.96■□□□□ 0.79
FARP1-229ENST00000600190 ZNF667Q5HYK9 610 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 SH3PXD2AQ5TCZ1 1133 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 CEP135Q66GS9 1140 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 SCARA5Q6ZMJ2 495 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 ARMCX6Q7L4S7 300 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 LPCAT2Q7L5N7 544 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 FAM35AQ86V20 835 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 SLC9A9Q8IVB4 645 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 TMEFF1Q8IYR6 380 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 FRMD1Q8N878 549 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 HMGB4Q8WW32 186 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 DHTKD1Q96HY7 919 aaPredicted RBP19.96■□□□□ 0.79
FARP1-229ENST00000600190 TNIP3Q96KP6 325 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 SPACA7Q96KW9 195 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 NACA2Q9H009 215 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 CCSER2Q9H7U1 834 aa19.96■□□□□ 0.79
FARP1-229ENST00000600190 CEP295Q9C0D2 2601 aa19.95■□□□□ 0.78
FARP1-229ENST00000600190 BICDL2A1A5D9 508 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms