RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 EHHADHQ08426 723 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 SLC23A3Q6PIS1 610 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 ARMCX6Q7L4S7 300 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 FAM35AQ86V20 835 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 ZNF513Q8N8E2 541 aaPredicted RBP18.22■□□□□ 0.51
SMG9-210ENST00000600097 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 SMARCD1Q96GM5 515 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
SMG9-210ENST00000600097 MED10Q9BTT4 135 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 NACA2Q9H009 215 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 GZF1Q9H116 711 aaPredicted RBP18.22■□□□□ 0.51
SMG9-210ENST00000600097 SPHK2Q9NRA0 654 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 TMEM74BQ9NUR3 256 aa18.22■□□□□ 0.51
SMG9-210ENST00000600097 MBD1Q9UIS9 605 aaPredicted RBP18.22■□□□□ 0.51
SMG9-210ENST00000600097 FAM92AA1XBS5 289 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 EXOC3O60645 756 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 CUTAO60888 179 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ZDHHC11BP0C7U3 371 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ENGP17813 658 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 BIRC3Q13489 604 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 BMT2Q1RMZ1 405 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ANO4Q32M45 955 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ZNF699Q32M78 642 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ZNF667Q5HYK9 610 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 PEAR1Q5VY43 1037 aaPredicted RBP18.21■□□□□ 0.51
SMG9-210ENST00000600097 SLC36A4Q6YBV0 504 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 RABEPKQ7Z6M1 372 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 BBS7Q8IWZ6 715 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 FRMD1Q8N878 549 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 NAT16Q8N8M0 369 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 TERB1Q8NA31 727 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 DEFB124Q8NES8 71 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 CEP76Q8TAP6 659 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 GOLGA5Q8TBA6 731 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 SMYD3Q9H7B4 428 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 CCSER2Q9H7U1 834 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ZDHHC4Q9NPG8 344 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 PILRBQ9UKJ0 227 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 ZMIZ1Q9ULJ6 1067 aa18.21■□□□□ 0.51
SMG9-210ENST00000600097 PVALEFA0A1B0GWK0 134 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 ZBTB24O43167 697 aaPredicted RBP18.2■□□□□ 0.5
SMG9-210ENST00000600097 CLSTN1O94985 981 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 YEATS4O95619 227 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 MAPK8P45983 427 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 ATXN3P54252 364 aaPredicted RBP18.2■□□□□ 0.5
SMG9-210ENST00000600097 CDH8P55286 799 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 KNOP1Q1ED39 458 aaKnown RBP18.2■□□□□ 0.5
SMG9-210ENST00000600097 DUOXA1Q1HG43 343 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 C10orf76Q5T2E6 689 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 PAQR9Q6ZVX9 377 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 TMEM25Q86YD3 366 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 SCNM1Q9BWG6 230 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 FBXO44Q9H4M3 255 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 GMIPQ9P107 970 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 TFIP11Q9UBB9 837 aaKnown RBP18.2■□□□□ 0.5
SMG9-210ENST00000600097 SLC6A14Q9UN76 642 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 STARD13Q9Y3M8 1113 aa18.2■□□□□ 0.5
SMG9-210ENST00000600097 UPK3BL1B0FP48 263 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 UPK3BL2E5RIL1 263 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 AP1G2O75843 785 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 CFIP05156 583 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 P4HA1P13674 534 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 HOXB2P14652 356 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 SPINK2P20155 84 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 ITPKAP23677 461 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 NTSR1P30989 418 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 CLDN10P78369 228 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 RPL6Q02878 288 aaKnown RBP18.19■□□□□ 0.5
SMG9-210ENST00000600097 GFPT1Q06210 699 aaPredicted RBP18.19■□□□□ 0.5
SMG9-210ENST00000600097 NCOA4Q13772 614 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 HTR3DQ70Z44 454 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 FUKQ8N0W3 1084 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 PARD3BQ8TEW8 1205 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 TMEM121BQ9BXQ6 578 aaPredicted RBP18.19■□□□□ 0.5
SMG9-210ENST00000600097 SLC39A2Q9NP94 309 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 FAM208BQ5VWN6 2430 aa18.19■□□□□ 0.5
SMG9-210ENST00000600097 GON4LQ3T8J9 2241 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 POLR2DO15514 142 aaKnown RBP18.18■□□□□ 0.5
SMG9-210ENST00000600097 TLR5O60602 858 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 ZNF217O75362 1048 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 SERPINF2P08697 491 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 GABRG2P18507 467 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 CASP4P49662 377 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 SEMA3BQ13214 749 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 GRAMD4Q6IC98 578 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 SDE2Q6IQ49 451 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 ACOT1Q86TX2 421 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 HDDC3Q8N4P3 179 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 GATA6Q92908 595 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 XPO6Q96QU8 1125 aaKnown RBP18.18■□□□□ 0.5
SMG9-210ENST00000600097 CSNK1G1Q9HCP0 422 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 TLR8Q9NR97 1041 aaKnown RBP18.18■□□□□ 0.5
SMG9-210ENST00000600097 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
SMG9-210ENST00000600097 ASCC3Q8N3C0 2202 aaKnown RBP18.18■□□□□ 0.5
SMG9-210ENST00000600097 LRRIQ3A6PVS8 624 aaPredicted RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 TOP3BO95985 862 aaKnown RBP18.17■□□□□ 0.5
SMG9-210ENST00000600097 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms