RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SH3BP1Q9Y3L3 701 aa19.82■□□□□ 0.76
PNKP-213ENST00000599543 MYO18AQ92614 2054 aaKnown RBP19.82■□□□□ 0.76
PNKP-213ENST00000599543 NUP205Q92621 2012 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 THADAQ6YHU6 1953 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 FAM92AA1XBS5 289 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 GDF9O60383 454 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 SMC2O95347 1197 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 FAM200BP0CF97 657 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 RPL13P26373 211 aaKnown RBP19.81■□□□□ 0.76
PNKP-213ENST00000599543 DGKEP52429 567 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 MAP3K7CLP57077 242 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 ELF2Q15723 593 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 CCDC6Q16204 474 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 NFIL3Q16649 462 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 PLK5Q496M5 336 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 C1orf220Q5T0J3 134 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 RHBDF2Q6PJF5 856 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 C12orf29Q8N999 325 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 OTUB2Q96DC9 234 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 ZFRQ96KR1 1074 aaKnown RBP19.81■□□□□ 0.76
PNKP-213ENST00000599543 PNKPQ96T60 521 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 SMOQ99835 787 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 MAN1B1Q9UKM7 699 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 PCDHGA5Q9Y5G8 931 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 ABCA7Q8IZY2 2146 aa19.81■□□□□ 0.76
PNKP-213ENST00000599543 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 BEST1O76090 585 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 RHOBTB1O94844 696 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 KAT7O95251 611 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 APODP05090 189 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 ZDHHC11BP0C7U3 371 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 ZNF806P0C7X5 589 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 TRIM49P0CI25 452 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 TRIM49CP0CI26 452 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 ADORA2BP29275 332 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 SLC6A11P48066 632 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 GCLMP48507 274 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 MRPS21P82921 87 aaKnown RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 SF3A2Q15428 464 aaKnown RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 FAM186BQ8IYM0 893 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 GUF1Q8N442 669 aaKnown RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 CCDC150Q8NCX0 1101 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 ZMIZ2Q8NF64 920 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 MMRN2Q9H8L6 949 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 CSNK1G1Q9HCP0 422 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 TLR8Q9NR97 1041 aaKnown RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 HOOK1Q9UJC3 728 aaKnown RBP19.8■□□□□ 0.76
PNKP-213ENST00000599543 MMP17Q9ULZ9 603 aa19.8■□□□□ 0.76
PNKP-213ENST00000599543 ACACBO00763 2458 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 TLR5O60602 858 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 GBP1P32455 592 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 PSMC2P35998 433 aaKnown RBP19.79■□□□□ 0.76
PNKP-213ENST00000599543 MPLP40238 635 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 KDSRQ06136 332 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 INCA1Q0VD86 236 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 ADAM9Q13443 819 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 LY6G5CQ5SRR4 150 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 BTBD8Q5XKL5 378 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 ANO7Q6IWH7 933 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 C12orf40Q86WS4 652 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 CCDC33Q8N5R6 958 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 TAS1R2Q8TE23 839 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 NT5C1AQ9BXI3 368 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 DNAI2Q9GZS0 605 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 NIF3L1Q9GZT8 377 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 DUSP15Q9H1R2 295 aaPredicted RBP19.79■□□□□ 0.76
PNKP-213ENST00000599543 ARHGEF4Q9NR80 690 aa19.79■□□□□ 0.76
PNKP-213ENST00000599543 DCLK1O15075 740 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 IRF1P10914 325 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 GRIA2P42262 883 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 PRCPP42785 496 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 GAD2Q05329 585 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 ENPEPQ07075 957 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 PPP3CAQ08209 521 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 CRY1Q16526 586 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 USP39Q53GS9 565 aaKnown RBP19.78■□□□□ 0.76
PNKP-213ENST00000599543 IL31Q6EBC2 164 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 CLEC20AQ6ZU45 233 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 C11orf74Q86VG3 221 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 TTC30AQ86WT1 665 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 SFTPA1Q8IWL2 248 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 BBS7Q8IWZ6 715 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 ALLCQ8N6M5 410 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 SPATA20Q8TB22 786 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 JAKMIP2Q96AA8 810 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 CNOT6LQ96LI5 555 aaKnown RBP19.78■□□□□ 0.76
PNKP-213ENST00000599543 GSDMAQ96QA5 445 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 TWNKQ96RR1 684 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 HNRNPABQ99729 332 aaKnown RBP19.78■□□□□ 0.76
PNKP-213ENST00000599543 TPSD1Q9BZJ3 242 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 CYP3A43Q9HB55 503 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 RMND1Q9NWS8 449 aa19.78■□□□□ 0.76
PNKP-213ENST00000599543 ALDH1A2O94788 518 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 CD58P19256 250 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 TIE1P35590 1138 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 CREB5Q02930 508 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 GOLGA8FQ08AF8 430 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 GOLGA8DPQ0D2H9 430 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 MESP2Q0VG99 397 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 HSF5Q4G112 596 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms