RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 USP39Q53GS9 565 aaKnown RBP10.36□□□□□ -0.75
VRK3-216ENST00000599342 LY6G5CQ5SRR4 150 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 IL31Q6EBC2 164 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 ANO7Q6IWH7 933 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 RHBDF2Q6PJF5 856 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 C11orf74Q86VG3 221 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 TTC30AQ86WT1 665 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 CCDC33Q8N5R6 958 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 C12orf29Q8N999 325 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 ZMIZ2Q8NF64 920 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 TAS1R2Q8TE23 839 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
VRK3-216ENST00000599342 JAKMIP2Q96AA8 810 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 CYFIP2Q96F07 1278 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 ZC3H10Q96K80 434 aaKnown RBP10.36□□□□□ -0.75
VRK3-216ENST00000599342 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
VRK3-216ENST00000599342 NIF3L1Q9GZT8 377 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 GOLPH3LQ9H4A5 285 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 CYP3A43Q9HB55 503 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 TMEM8AQ9HCN3 771 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 CSNK1G1Q9HCP0 422 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 ARHGEF4Q9NR80 690 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 IL37Q9NZH6 218 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 MMP17Q9ULZ9 603 aa10.36□□□□□ -0.75
VRK3-216ENST00000599342 GOLGA6L4A6NEF3 574 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 GDF9O60383 454 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 ZDHHC11BP0C7U3 371 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 CD58P19256 250 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 ACO1P21399 889 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 KCNA4P22459 653 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 GTF2H1P32780 548 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 TIE1P35590 1138 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 ATP5C1P36542 298 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 GRIA2P42262 883 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 SLC6A11P48066 632 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 PPP3CAQ08209 521 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 SF3A2Q15428 464 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 CRY1Q16526 586 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 ANO4Q32M45 955 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 EDRF1Q3B7T1 1238 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 EOGTQ5NDL2 527 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 C1orf220Q5T0J3 134 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 KRT39Q6A163 491 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 CLEC20AQ6ZU45 233 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 C12orf40Q86WS4 652 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 BBS7Q8IWZ6 715 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 CNOT6LQ96LI5 555 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 HNRNPABQ99729 332 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 TPSD1Q9BZJ3 242 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 APOBEC3GQ9HC16 384 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 PNPLA8Q9NP80 782 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 POLMQ9NP87 494 aaPredicted RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 SPHK2Q9NRA0 654 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 VPS45Q9NRW7 570 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 RMND1Q9NWS8 449 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 LSM7Q9UK45 103 aaKnown RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
VRK3-216ENST00000599342 SCML2Q9UQR0 700 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 PCDHA5Q9Y5H7 936 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 DNAH14Q0VDD8 3507 aa10.35□□□□□ -0.75
VRK3-216ENST00000599342 TBC1D3BA6NDS4 549 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 DCLK1O15075 740 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 CETN3O15182 167 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 CYP26A1O43174 497 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 HOXC11O43248 304 aaPredicted RBP10.34□□□□□ -0.75
VRK3-216ENST00000599342 STX10O60499 249 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 CILPO75339 1184 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TNFRSF4P43489 277 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 MXI1P50539 228 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 LIMK1P53667 647 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 CREB5Q02930 508 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 ZNF394Q53GI3 561 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 PPM1JQ5JR12 505 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 GPRIN1Q7Z2K8 1008 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TRMT11Q7Z4G4 463 aaKnown RBP10.34□□□□□ -0.75
VRK3-216ENST00000599342 TADA2BQ86TJ2 420 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 RASSF3Q86WH2 238 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TTC39CQ8N584 583 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 ALLCQ8N6M5 410 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 NAT16Q8N8M0 369 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 IL17RCQ8NAC3 791 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TXNDC5Q8NBS9 432 aaKnown RBP10.34□□□□□ -0.75
VRK3-216ENST00000599342 MDGA1Q8NFP4 955 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 WHAMMQ8TF30 809 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 SPACA7Q96KW9 195 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TWNKQ96RR1 684 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 TSG101Q99816 390 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 DUSP9Q99956 384 aaKnown RBP10.34□□□□□ -0.75
VRK3-216ENST00000599342 CYLDQ9NQC7 956 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 BCCIPQ9P287 314 aaKnown RBP eCLIP10.34□□□□□ -0.75
VRK3-216ENST00000599342 DEC1Q9P2X7 70 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 INVSQ9Y283 1065 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 KIAA1549LQ6ZVL6 1849 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 MYO16Q9Y6X6 1858 aa10.34□□□□□ -0.75
VRK3-216ENST00000599342 HHLA1C9JL84 531 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms