RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ZNF840PA6NDX5 716 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 SOBPA7XYQ1 873 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 MMEP08473 750 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 ZDHHC11BP0C7U3 371 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 CHRNB2P17787 502 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 DDX6P26196 483 aaKnown RBP eCLIP19.13■□□□□ 0.65
LIG1-216ENST00000598938 CDH5P33151 784 aaPredicted RBP19.13■□□□□ 0.65
LIG1-216ENST00000598938 RGS7P49802 495 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 TKTL1P51854 596 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 CDR2Q01850 454 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 GPR158Q5T848 1215 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 TAF3Q5VWG9 929 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 SNX30Q5VWJ9 437 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 E4F1Q66K89 784 aaPredicted RBP19.13■□□□□ 0.65
LIG1-216ENST00000598938 CCDC186Q7Z3E2 898 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 PASD1Q8IV76 773 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 FLCNQ8NFG4 579 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 MRPS31Q92665 395 aaKnown RBP19.13■□□□□ 0.65
LIG1-216ENST00000598938 MCRS1Q96EZ8 462 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 ZSWIM3Q96MP5 696 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 TASP1Q9H6P5 420 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 LRRC4Q9HBW1 653 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 CYLDQ9NQC7 956 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 AIPL1Q9NZN9 384 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 GMIPQ9P107 970 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 IGSF9Q9P2J2 1179 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 ZMYM5Q9UJ78 669 aa19.13■□□□□ 0.65
LIG1-216ENST00000598938 ZNF638Q14966 1978 aaKnown RBP19.13■□□□□ 0.65
LIG1-216ENST00000598938 DOCK8Q8NF50 2099 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 CCDC172P0C7W6 258 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 ZNF75DP51815 510 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 ZBED6P86452 979 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 ARID5AQ03989 594 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 ADIGQ0VDE8 80 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 TRIM14Q14142 442 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 SFMBT2Q5VUG0 894 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 PM20D1Q6GTS8 502 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 MON1AQ86VX9 555 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 SCML4Q8N228 414 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 ZNF397Q8NF99 534 aaPredicted RBP19.12■□□□□ 0.65
LIG1-216ENST00000598938 SLC4A5Q9BY07 1137 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 NUCKS1Q9H1E3 243 aaKnown RBP19.12■□□□□ 0.65
LIG1-216ENST00000598938 CHORDC1Q9UHD1 332 aaPredicted RBP19.12■□□□□ 0.65
LIG1-216ENST00000598938 DENND4CQ5VZ89 1909 aa19.12■□□□□ 0.65
LIG1-216ENST00000598938 LSM8O95777 96 aaKnown RBP19.11■□□□□ 0.65
LIG1-216ENST00000598938 ZBED1O96006 694 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 WEE1P30291 646 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 PRKCIP41743 596 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 ACADSBP45954 432 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 PGFP49763 221 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 FMO1Q01740 532 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 PDCLQ13371 301 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 ANGPT1Q15389 498 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 ASIC2Q16515 512 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 TXNDC8Q6A555 127 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 BHLHA9Q7RTU4 235 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 TMEM35BQ8NCS4 154 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 C1orf131Q8NDD1 294 aaKnown RBP19.11■□□□□ 0.65
LIG1-216ENST00000598938 CPLX3Q8WVH0 158 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 SYN2Q92777 582 aaPredicted RBP19.11■□□□□ 0.65
LIG1-216ENST00000598938 MRFAP1L1Q96HT8 127 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 ASB16Q96NS5 453 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 SYT11Q9BT88 431 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 SLC46A2Q9BY10 475 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 ULBP1Q9BZM6 244 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 PDCL3Q9H2J4 239 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 SLITRK6Q9H5Y7 841 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 TRPV4Q9HBA0 871 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 CNGB3Q9NQW8 809 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 LUC7L2Q9Y383 392 aaKnown RBP19.11■□□□□ 0.65
LIG1-216ENST00000598938 CEP83Q9Y592 693 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 WDR87Q6ZQQ6 2873 aa19.11■□□□□ 0.65
LIG1-216ENST00000598938 MYO16Q9Y6X6 1858 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 ANHXE9PGG2 379 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 OAS1P00973 400 aaKnown RBP19.1■□□□□ 0.65
LIG1-216ENST00000598938 USP17L7P0C7H9 530 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 LCP1P13796 627 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 PFKLP17858 780 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 FCARP24071 287 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 CASP14P31944 242 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 FAM78AQ5JUQ0 283 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 SCD5Q86SK9 330 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 TMEM110Q86TL2 294 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 SIX6OS1Q8N1H7 587 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 MAB21L3Q8N8X9 362 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 DTWD2Q8NBA8 298 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 ZSCAN18Q8TBC5 510 aaPredicted RBP19.1■□□□□ 0.65
LIG1-216ENST00000598938 AGPAT1Q99943 283 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 KCNK12Q9HB15 430 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 NMUR1Q9HB89 426 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 TLR8Q9NR97 1041 aaKnown RBP19.1■□□□□ 0.65
LIG1-216ENST00000598938 FANCMQ8IYD8 2048 aa19.1■□□□□ 0.65
LIG1-216ENST00000598938 A0A1W2PQH9 124 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 C2orf78A6NCI8 922 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 FBXO21O94952 628 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 CYP1A1P04798 512 aaPredicted RBP19.09■□□□□ 0.65
LIG1-216ENST00000598938 PSEN1P49768 467 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 TUBP50607 506 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 DAOAP59103 153 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 NOMO3P69849 1222 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms