RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-205	ENST00000595797	FAM193A	P78312	1265 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	ZXDB	P98169	803 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	DUOXA2	Q1HG44	320 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	HECTD3	Q5T447	861 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	SV2B	Q7L1I2	683 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	ADAMTS14	Q8WXS8	1223 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	C8orf48	Q96LL4	319 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	MED10	Q9BTT4	135 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	CRTAC1	Q9NQ79	661 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	DNAJC17	Q9NVM6	304 aa	Known RBP	13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	PTPRB	P23467	1997 aa		13.56	□□□□□ -0.24
PAF1-205	ENST00000595797	DMXL2	Q8TDJ6	3036 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	FAM221B	A6H8Z2	402 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	HOXC11	O43248	304 aa	Predicted RBP	13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	OLFM2	O95897	454 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	CD59	P13987	128 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	GJB2	P29033	226 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	WNT7B	P56706	349 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	STARD3	Q14849	445 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	RRAGB	Q5VZM2	374 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	NUP93	Q8N1F7	819 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	PNPLA1	Q8N8W4	532 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	IPO4	Q8TEX9	1081 aa	Known RBP	13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	ERLEC1	Q96DZ1	483 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	CAMK1G	Q96NX5	476 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	CBWD1	Q9BRT8	395 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	MIR1-1HG	Q9H1L0	117 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	SPHK2	Q9NRA0	654 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	INTS13	Q9NVM9	706 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	SIX4	Q9UIU6	781 aa		13.55	□□□□□ -0.24
PAF1-205	ENST00000595797	LSM7	Q9UK45	103 aa	Known RBP	13.55	□□□□□ -0.24
PAF1-205	ENST00000595797		A0A0A0MRY4	1105 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797		A8MXQ7	604 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	NEDD8-MDP1	E9PL57	170 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	PPP1R37	O75864	691 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	CER1	O95813	267 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	TNNI1	P19237	187 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	NDUFV2	P19404	249 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	TRIM21	P19474	475 aa	Known RBP	13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	KCNA1	Q09470	495 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	MESP2	Q0VG99	397 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	TRPC3	Q13507	836 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	ENGASE	Q8NFI3	743 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	KBTBD7	Q8WVZ9	684 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	OVCA2	Q8WZ82	227 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	LRIG1	Q96JA1	1093 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	FAM84A	Q96KN4	292 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	BBS2	Q9BXC9	721 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	SMC3	Q9UQE7	1217 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	PLXNB3	Q9ULL4	1909 aa		13.54	□□□□□ -0.24
PAF1-205	ENST00000595797	URB1	O60287	2271 aa	Known RBP	13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	SHROOM3	Q8TF72	1996 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797		A0A1B0GTW7	788 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	COCH	O43405	550 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	DLAT	P10515	647 aa	Known RBP	13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	PTPN1	P18031	435 aa	Known RBP	13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	GRIK2	Q13002	908 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	SF3A1	Q15459	793 aa	Known RBP	13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	EGFLAM	Q63HQ2	1017 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	TOGARAM2	Q6ZUX3	1019 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	BRAP	Q7Z569	592 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	WDR49	Q8IV35	697 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	SLC41A1	Q8IVJ1	513 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	BBS7	Q8IWZ6	715 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	CCDC65	Q8IXS2	484 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	ZSWIM2	Q8NEG5	633 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	MDM1	Q8TC05	714 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	ZNF518B	Q9C0D4	1074 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	KIAA1586	Q9HCI6	787 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	OLFML3	Q9NRN5	406 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	PANK4	Q9NVE7	773 aa		13.53	□□□□□ -0.24
PAF1-205	ENST00000595797	APC2	O95996	2303 aa		13.52	□□□□□ -0.24
PAF1-205	ENST00000595797	GOLGA8CP	A6NN73	597 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	PHACTR2	O75167	634 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	CD6	P30203	668 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	STAT6	P42226	847 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	MATK	P42679	507 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	E2F5	Q15329	346 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	WDR72	Q3MJ13	1102 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	LARP1B	Q659C4	914 aa	Known RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	IL27RA	Q6UWB1	636 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	CCDC73	Q6ZRK6	1079 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	HSCB	Q8IWL3	235 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	ETFBKMT	Q8IXQ9	262 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	B3GALNT2	Q8NCR0	500 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	OR5B17	Q8NGF7	314 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	MRPL45	Q9BRJ2	306 aa	Known RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	WDR35	Q9P2L0	1181 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	NXF1	Q9UBU9	619 aa	Known RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	RAX	Q9Y2V3	346 aa		13.52	□□□□□ -0.25
PAF1-205	ENST00000595797	CLDN5	O00501	218 aa		13.51	□□□□□ -0.25
PAF1-205	ENST00000595797	SYNCRIP	O60506	623 aa	Known RBP	13.51	□□□□□ -0.25
PAF1-205	ENST00000595797	TACC1	O75410	805 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms