RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ZNF687Q8N1G0 1237 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 CD101Q93033 1021 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 OTUB2Q96DC9 234 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 FAM81BQ96LP2 452 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 LRRC4Q9HBW1 653 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 RBM12Q9NTZ6 932 aaKnown RBP18.29■□□□□ 0.52
IRF3-208ENST00000594387 NAGPAQ9UK23 515 aa18.29■□□□□ 0.52
IRF3-208ENST00000594387 LSM7Q9UK45 103 aaKnown RBP18.29■□□□□ 0.52
IRF3-208ENST00000594387 HHLA1C9JL84 531 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 ADH1CP00326 375 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 PAEPP09466 180 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 KIF11P52732 1056 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 STILQ15468 1287 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 GOLGA7BQ2TAP0 167 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 TMEM196Q5HYL7 178 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 RIN3Q8TB24 985 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 CNOT6LQ96LI5 555 aaKnown RBP18.28■□□□□ 0.52
IRF3-208ENST00000594387 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
IRF3-208ENST00000594387 ZSCAN32Q9NX65 697 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 PCDHGA2Q9Y5H1 932 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 R4GN57 208 aa18.28■□□□□ 0.52
IRF3-208ENST00000594387 OTOL1A6NHN0 477 aaPredicted RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 CYP26A1O43174 497 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 IRF1P10914 325 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 RARGP13631 454 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 PLA2G4AP47712 749 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 GCNT1Q02742 428 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 CCINQ13939 588 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 PREPLQ4J6C6 727 aaPredicted RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 C10orf120Q5SQS8 335 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 BTBD8Q5XKL5 378 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 RSRC2Q7L4I2 434 aaKnown RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 RRAGAQ7L523 313 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 GPRIN1Q7Z2K8 1008 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 CCDC186Q7Z3E2 898 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 PIGZQ86VD9 579 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 MAML2Q8IZL2 1156 aaPredicted RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 ADGRG2Q8IZP9 1017 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 PRMT8Q9NR22 394 aaPredicted RBP18.27■□□□□ 0.52
IRF3-208ENST00000594387 LMBRD1Q9NUN5 540 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 DNMT3LQ9UJW3 386 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 CACNA1HO95180 2353 aa18.27■□□□□ 0.52
IRF3-208ENST00000594387 A0A1W2PQH9 124 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
IRF3-208ENST00000594387 ERCC5P28715 1186 aaPredicted RBP18.26■□□□□ 0.51
IRF3-208ENST00000594387 TKTL1P51854 596 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 MFAP3P55082 362 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 ZXDBP98169 803 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 CT47A1Q5JQC4 288 aaPredicted RBP18.26■□□□□ 0.51
IRF3-208ENST00000594387 FSTL4Q6MZW2 842 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 TSSK4Q6SA08 328 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 GBP6Q6ZN66 633 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 NUDT18Q6ZVK8 323 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
IRF3-208ENST00000594387 THAP9Q9H5L6 903 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 CYLDQ9NQC7 956 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 CLIC5Q9NZA1 410 aa18.26■□□□□ 0.51
IRF3-208ENST00000594387 PRR23AA6NEV1 266 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 XPO1O14980 1071 aaKnown RBP18.25■□□□□ 0.51
IRF3-208ENST00000594387 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 KRT5P13647 590 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 GAD2Q05329 585 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 PDE4CQ08493 712 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 DHCR24Q15392 516 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 KLHDC10Q6PID8 442 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 ENOSF1Q7L5Y1 443 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 SIX6OS1Q8N1H7 587 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 ZNF276Q8N554 614 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 LMO3Q8TAP4 145 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 CHFRQ96EP1 664 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 UBE2TQ9NPD8 197 aaPredicted RBP18.25■□□□□ 0.51
IRF3-208ENST00000594387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.25■□□□□ 0.51
IRF3-208ENST00000594387 STRIP2Q9ULQ0 834 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 SLC8A2Q9UPR5 921 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 USP3Q9Y6I4 520 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 KIAA1549LQ6ZVL6 1849 aa18.25■□□□□ 0.51
IRF3-208ENST00000594387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 SCAMP3O14828 347 aaKnown RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 MED7O43513 233 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 ZBED1O96006 694 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 EGFP01133 1207 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 CYP17A1P05093 508 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 ADH5P11766 374 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 COG7P83436 770 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 CNGA2Q16280 664 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 LCLAT1Q6UWP7 414 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 Q6ZS52 159 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 UBR7Q8N806 425 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 RBBP8NLQ8NC74 664 aaPredicted RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 UBA3Q8TBC4 463 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 GOLGA1Q92805 767 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 SECISBP2LQ93073 1101 aaKnown RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 HINFPQ9BQA5 517 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 KLF16Q9BXK1 252 aaPredicted RBP18.24■□□□□ 0.51
IRF3-208ENST00000594387 RAB23Q9ULC3 237 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 ZNF510Q9Y2H8 683 aa18.24■□□□□ 0.51
IRF3-208ENST00000594387 RALGAPA1Q6GYQ0 2036 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms