RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 KRT7P08729 469 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 GLUD2P49448 558 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 ELF2Q15723 593 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 CYP4V2Q6ZWL3 525 aaPredicted RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 DEFB106AQ8N104 65 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 SCAMP5Q8TAC9 235 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 SP7Q8TDD2 431 aaPredicted RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 NT5C3BQ969T7 300 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 RAD9AQ99638 391 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 NCAPGQ9BPX3 1015 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 NGRNQ9NPE2 291 aaKnown RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 PCDHB12Q9Y5F1 795 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 WDR27A2RRH5 827 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 TRUB2O95900 331 aaKnown RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 LTFP02788 710 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 FYNP06241 537 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 TFE3P19532 575 aaPredicted RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 NOS2P35228 1153 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 HDAC4P56524 1084 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 ROR1Q01973 937 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 SLC13A5Q86YT5 568 aaPredicted RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 RBM41Q96IZ5 413 aaKnown RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 PEBP4Q96S96 227 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 LBHD1Q9BQE6 289 aaPredicted RBP21.75■■□□□ 1.07
PNKP-203ENST00000593946 KRIT1O00522 736 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 KRT1P04264 644 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
PNKP-203ENST00000593946 RPL17P18621 184 aaKnown RBP21.74■■□□□ 1.07
PNKP-203ENST00000593946 SLC25A52Q3SY17 297 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 DCAF6Q58WW2 860 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 STRADAQ7RTN6 431 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 RCOR2Q8IZ40 523 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 NPY6RQ99463 290 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 CLSTN3Q9BQT9 956 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 AP1M1Q9BXS5 423 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 CRISPLD1Q9H336 500 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 ZWILCHQ9H900 591 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 KLHL11Q9NVR0 708 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 PCSK1NQ9UHG2 260 aa21.74■■□□□ 1.07
PNKP-203ENST00000593946 CCDC188H7C350 402 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 C2CD2LO14523 706 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 FSCN2O14926 492 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 OR1D2P34982 312 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 GPR15P49685 360 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 DDR2Q16832 855 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 SMTNL2Q2TAL5 461 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 RASIP1Q5U651 963 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 BNIPLQ7Z465 357 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 VPS52Q8N1B4 723 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 SLITRK1Q96PX8 696 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 TBCBQ99426 244 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 MTIF3Q9H2K0 278 aaKnown RBP21.73■■□□□ 1.07
PNKP-203ENST00000593946 STK39Q9UEW8 545 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 GBF1Q92538 1859 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 CEP290O15078 2479 aa21.73■■□□□ 1.07
PNKP-203ENST00000593946 DYNC1I1O14576 645 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 PRPSAP2O60256 369 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 FGF18O76093 207 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 URODP06132 367 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 HAPLN1P10915 354 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 COPS2P61201 443 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 SMC1AQ14683 1233 aaKnown RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 KCNT1Q5JUK3 1230 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 OTUD1Q5VV17 481 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 SYPL2Q5VXT5 272 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 ANKS1BQ7Z6G8 1248 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 CCDC50Q8IVM0 306 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 GPR65Q8IYL9 337 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 NUP93Q8N1F7 819 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 RAPGEF5Q92565 580 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 DPF3Q92784 378 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 ACSF2Q96CM8 615 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 STAP1Q9ULZ2 295 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 NR2E1Q9Y466 385 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 TCRBV7S2A1N4TA0A589 114 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 C3orf70A6NLC5 250 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 PI4K2BG5E9Z4 385 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 TLL1O43897 1013 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 ENDOD1O94919 500 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 RARAP10276 462 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 PTPN7P35236 360 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 ZFYVE27Q5T4F4 411 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 SDHAF4Q5VUM1 108 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 ADAT2Q7Z6V5 191 aaKnown RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 GPR161Q8N6U8 529 aaKnown RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 CMASQ8NFW8 434 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 RNF25Q96BH1 459 aaPredicted RBP21.72■■□□□ 1.07
PNKP-203ENST00000593946 HERPUD2Q9BSE4 406 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 IL37Q9NZH6 218 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 CALCOCO1Q9P1Z2 691 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 NAALADL1Q9UQQ1 740 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 SLC27A5Q9Y2P5 690 aa21.72■■□□□ 1.07
PNKP-203ENST00000593946 RALAP11233 206 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 SULT1E1P49888 294 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 PITX1P78337 314 aaPredicted RBP21.71■■□□□ 1.07
PNKP-203ENST00000593946 KRT17Q04695 432 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 DUSP4Q13115 394 aa21.71■■□□□ 1.07
PNKP-203ENST00000593946 SIX1Q15475 284 aaPredicted RBP21.71■■□□□ 1.07
PNKP-203ENST00000593946 MFSD7Q6UXD7 560 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms