RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 B3GNT5Q9BYG0 378 aa15.64■□□□□ 0.09
PNKP-202ENST00000593706 NACA2Q9H009 215 aa15.64■□□□□ 0.09
PNKP-202ENST00000593706 ZDHHC4Q9NPG8 344 aa15.64■□□□□ 0.09
PNKP-202ENST00000593706 SH3BP1Q9Y3L3 701 aa15.64■□□□□ 0.09
PNKP-202ENST00000593706 PCDH15Q96QU1 1955 aa15.64■□□□□ 0.09
PNKP-202ENST00000593706 DMXL2Q8TDJ6 3036 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 A0A1W2PQ27 194 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 A0A1W2PQ64 194 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 A0A1W2PQD8 194 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 E2F8A0AVK6 867 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 COCHO43405 550 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 STAU1O95793 577 aaKnown RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 P2RY2P41231 377 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 GRIA2P42262 883 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 AFMP43652 599 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 NDUFA8P51970 172 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 SNRPFP62306 86 aaKnown RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 IRX4P78413 519 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 GAD2Q05329 585 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 LMAN2Q12907 356 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 BYSLQ13895 437 aaKnown RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 ZNF699Q32M78 642 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 TRIM61Q5EBN2 209 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 LY6G5CQ5SRR4 150 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 FAM35AQ86V20 835 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 TMEFF1Q8IYR6 380 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 OVCA2Q8WZ82 227 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 OTUB2Q96DC9 234 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 SMARCD1Q96GM5 515 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 SCAND2PQ9GZW5 306 aaPredicted RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 GOLPH3LQ9H4A5 285 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 SMYD3Q9H7B4 428 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 DMAP1Q9NPF5 467 aaPredicted RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 USP25Q9UHP3 1055 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 ATP6V1DQ9Y5K8 247 aa15.63■□□□□ 0.09
PNKP-202ENST00000593706 ANKRD11Q6UB99 2663 aaPredicted RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 ATXN2Q99700 1313 aaKnown RBP15.63■□□□□ 0.09
PNKP-202ENST00000593706 PKD1L2Q7Z442 2459 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 FREM2Q5SZK8 3169 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 EXOC3O60645 756 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 IRF1P10914 325 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 ATICP31939 592 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 TNFRSF4P43489 277 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 MAPK8P45983 427 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 SLC5A3P53794 718 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 PREPLQ4J6C6 727 aaPredicted RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 HECTD3Q5T447 861 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 EMC10Q5UCC4 262 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 UNQ6494/PRO21346Q6UXR6 183 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 TRMT11Q7Z4G4 463 aaKnown RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 CEP57L1Q8IYX8 460 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 NAT16Q8N8M0 369 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 KIAA0895Q8NCT3 520 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 TNIP3Q96KP6 325 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 KCNK16Q96T55 309 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 GZF1Q9H116 711 aaPredicted RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 CCSER2Q9H7U1 834 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 KRT82Q9NSB4 513 aa15.62■□□□□ 0.09
PNKP-202ENST00000593706 CGNQ9P2M7 1197 aaKnown RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 EVLQ9UI08 416 aaPredicted RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
PNKP-202ENST00000593706 NBEAQ8NFP9 2946 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 TBC1D3BA6NDS4 549 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 C1QTNF9BB2RNN3 333 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 CDX4O14627 284 aaPredicted RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 TNFRSF10BO14763 440 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 PROS1P07225 676 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 C1QTNF9P0C862 333 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 CEACAM1P13688 526 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 CSRP1P21291 193 aaKnown RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 PTGER3P43115 390 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 KIR2DL1P43626 348 aaPredicted RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 CASP4P49662 377 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 BECN1Q14457 450 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 ANO4Q32M45 955 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 ZNF667Q5HYK9 610 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 C10orf76Q5T2E6 689 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 LYSMD4Q5XG99 296 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 SYT12Q8IV01 421 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 C12orf56Q8IXR9 622 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 ZNF513Q8N8E2 541 aaPredicted RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 DEFB124Q8NES8 71 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 SCAMP5Q8TAC9 235 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 TMEM174Q8WUU8 243 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 ZNF516Q92618 1163 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 ZFRQ96KR1 1074 aaKnown RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 XYLT2Q9H1B5 865 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 SLC39A2Q9NP94 309 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 GMIPQ9P107 970 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 DEC1Q9P2X7 70 aa15.61■□□□□ 0.09
PNKP-202ENST00000593706 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
PNKP-202ENST00000593706 ADAM23O75077 832 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 AP1G2O75843 785 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 CFIP05156 583 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 MYL1P05976 194 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms