RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 BEST1O76090 585 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 RTN3O95197 1032 aaPredicted RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 CTSAP10619 480 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 CTNNA2P26232 953 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 SSR1P43307 286 aaKnown RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 TUFMP49411 452 aaKnown RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 NDUFV1P49821 464 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 SMC1AQ14683 1233 aaKnown RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 MGAT5BQ3V5L5 792 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 ODF2Q5BJF6 829 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 SCUBE3Q8IX30 993 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 ZMIZ2Q8NF64 920 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 PBKQ96KB5 322 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 BTBD6Q96KE9 485 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 PGLYRP2Q96PD5 576 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 VN1R3Q9BXE9 311 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 TLR10Q9BXR5 811 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 ULBP1Q9BZM6 244 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 GOLPH3Q9H4A6 298 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 FNIP2Q9P278 1114 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 RNF14Q9UBS8 474 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 AFF4Q9UHB7 1163 aaKnown RBP15.36■□□□□ 0.05
CAPN12-202ENST00000593700 MRFAP1Q9Y605 127 aa15.36■□□□□ 0.05
CAPN12-202ENST00000593700 WDR27A2RRH5 827 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 ZBED1O96006 694 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 POU3F3P20264 500 aaPredicted RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CYP2F1P24903 491 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 ELF1P32519 619 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 OR1D2P34982 312 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 RFC1P35251 1148 aaPredicted RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CETN2P41208 172 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 PAFAH1B1P43034 410 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 DNA2P51530 1060 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 ZNF143P52747 638 aaPredicted RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 SLC5A3P53794 718 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 DAOAP59103 153 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 RNASE9P60153 205 aaKnown RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 PDE12Q6L8Q7 609 aaKnown RBP15.35■□□□□ 0.05
CAPN12-202ENST00000593700 TAS1R1Q7RTX1 841 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 RHOT1Q8IXI2 618 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CEP112Q8N8E3 955 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 JOSD2Q8TAC2 188 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 OSBPL9Q96SU4 736 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 KCNK16Q96T55 309 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 EMILIN2Q9BXX0 1053 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 RHOBTB2Q9BYZ6 727 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 CARD9Q9H257 536 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 ENTPD7Q9NQZ7 604 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 COMMD8Q9NX08 183 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 RRN3Q9NYV6 651 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 TMEM59LQ9UK28 342 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 OBSL1O75147 1896 aa15.35■□□□□ 0.05
CAPN12-202ENST00000593700 C2CD4BA6NLJ0 364 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 HHLA1C9JL84 531 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 KCNK3O14649 394 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 CAPN9O14815 690 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 NCK2O43639 380 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 GJB6O95452 261 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 ADH1AP07327 375 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 HAPLN1P10915 354 aaPredicted RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 PDGFRAP16234 1089 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 PTPN9P43378 593 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 RWDD2BP57060 319 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 YWHAZP63104 245 aaKnown RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 AMPD2Q01433 879 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 PLD1Q13393 1074 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 VEPH1Q14D04 833 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 ZFYVE27Q5T4F4 411 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 TMC7Q7Z402 723 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 ZNF461Q8TAF7 563 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 RXFP2Q8WXD0 754 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 NAP1L3Q99457 506 aaPredicted RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 C17orf80Q9BSJ5 609 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 L2HGDHQ9H9P8 463 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 POPDC2Q9HBU9 364 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 TMEM51Q9NW97 253 aa15.34■□□□□ 0.05
CAPN12-202ENST00000593700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 PACSIN2Q9UNF0 486 aaPredicted RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 COL4A4P53420 1690 aaPredicted RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 LAMA2P24043 3122 aaKnown RBP15.34■□□□□ 0.05
CAPN12-202ENST00000593700 ATG2AQ2TAZ0 1938 aa15.33■□□□□ 0.05
CAPN12-202ENST00000593700 DENND4CQ5VZ89 1909 aa15.33■□□□□ 0.05
CAPN12-202ENST00000593700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.33■□□□□ 0.04
CAPN12-202ENST00000593700 FANCGO15287 622 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms