RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ZACNQ401N2 412 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 KMT5BQ4FZB7 885 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 PHTF2Q8N3S3 785 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 TAF4BQ92750 862 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 SH3BP1Q9Y3L3 701 aa25.34■■□□□ 1.65
LSM4-202ENST00000593564 PDXKO00764 312 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 HOXC11O43248 304 aaPredicted RBP25.33■■□□□ 1.65
LSM4-202ENST00000593564 NR3C1P04150 777 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 KDSRQ06136 332 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 PKP1Q13835 747 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 EOGTQ5NDL2 527 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 UNC93AQ86WB7 457 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 ETFBKMTQ8IXQ9 262 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 CRYBG2Q8N1P7 616 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 ZMIZ2Q8NF64 920 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 TMC2Q8TDI7 906 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 SMOQ99835 787 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 CSNK1G1Q9HCP0 422 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 POLMQ9NP87 494 aaPredicted RBP25.33■■□□□ 1.65
LSM4-202ENST00000593564 ANGPTL2Q9UKU9 493 aa25.33■■□□□ 1.65
LSM4-202ENST00000593564 LNP1A1A4G5 178 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 KCNK5O95279 499 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 CCDC130P13994 396 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 EMC10Q5UCC4 262 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 BTBD8Q5XKL5 378 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 CYP2U1Q7Z449 544 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 TTC30AQ86WT1 665 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 BBS7Q8IWZ6 715 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 SLC2A14Q8TDB8 520 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 WHAMMQ8TF30 809 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 FBXO44Q9H4M3 255 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 HMGXB4Q9UGU5 601 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 MYOFQ9NZM1 2061 aa25.32■■□□□ 1.64
LSM4-202ENST00000593564 IKBKBO14920 756 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 KHNYNO15037 678 aaKnown RBP25.31■■□□□ 1.64
LSM4-202ENST00000593564 ADAM23O75077 832 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 KRT37O76014 449 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 BEST1O76090 585 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 ASS1P00966 412 aaKnown RBP25.31■■□□□ 1.64
LSM4-202ENST00000593564 MYL1P05976 194 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 P2RY2P41231 377 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 NDST1P52848 882 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 SHC2P98077 582 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 PREPLQ4J6C6 727 aaPredicted RBP25.31■■□□□ 1.64
LSM4-202ENST00000593564 SV2AQ7L0J3 742 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 KCNV2Q8TDN2 545 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 NACA2Q9H009 215 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 SPHK2Q9NRA0 654 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 USP25Q9UHP3 1055 aa25.31■■□□□ 1.64
LSM4-202ENST00000593564 C4orf47A7E2U8 309 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 TLR5O60602 858 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 PFKFB1P16118 471 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 ASPAP45381 313 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 ORC1Q13415 861 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 ST3GAL2Q16842 350 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 SPACA7Q96KW9 195 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 TLR8Q9NR97 1041 aaKnown RBP25.3■■□□□ 1.64
LSM4-202ENST00000593564 DEC1Q9P2X7 70 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 FRMD4BQ9Y2L6 1034 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 NUP205Q92621 2012 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 CEP295Q9C0D2 2601 aa25.3■■□□□ 1.64
LSM4-202ENST00000593564 THADAQ6YHU6 1953 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 USP24Q9UPU5 2620 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 TBC1D3BA6NDS4 549 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 TULP3O75386 442 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 CMA1P23946 247 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 DHPSP49366 369 aaPredicted RBP25.29■■□□□ 1.64
LSM4-202ENST00000593564 PGFP49763 221 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 MAP3K7CLP57077 242 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 C1orf220Q5T0J3 134 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 DAB2IPQ5VWQ8 1189 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 CEP135Q66GS9 1140 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 SPOPLQ6IQ16 392 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 TMEM25Q86YD3 366 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 NAT16Q8N8M0 369 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 C12orf29Q8N999 325 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 RLN3Q8WXF3 142 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 WBP2Q969T9 261 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 CHAMP1Q96JM3 812 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 FAM49BQ9NUQ9 324 aa25.29■■□□□ 1.64
LSM4-202ENST00000593564 BCCIPQ9P287 314 aaKnown RBP eCLIP25.29■■□□□ 1.64
LSM4-202ENST00000593564 A0A1B0GVL5 298 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 MAPK13O15264 365 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 HLA-DRAP01903 254 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 IRF1P10914 325 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 PIK3CAP42336 1068 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 PSAPL1Q6NUJ1 521 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 LPCAT2Q7L5N7 544 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 TRMT11Q7Z4G4 463 aaKnown RBP25.28■■□□□ 1.64
LSM4-202ENST00000593564 TERB1Q8NA31 727 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 ZDHHC4Q9NPG8 344 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 TRAF3IP3Q9Y228 551 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 HPSEQ9Y251 543 aa25.28■■□□□ 1.64
LSM4-202ENST00000593564 TCRBV21S2A2A0A5A6 115 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 PATE3B3GLJ2 98 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 CALUO43852 315 aaPredicted RBP25.27■■□□□ 1.64
LSM4-202ENST00000593564 GREM1O60565 184 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 FAM200BP0CF97 657 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 TRIM21P19474 475 aaKnown RBP25.27■■□□□ 1.64
LSM4-202ENST00000593564 INCA1Q0VD86 236 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms