RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 IZUMO3Q5VZ72 239 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 CD300LGQ6UXG3 332 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 RTN4RL1Q86UN2 441 aaPredicted RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 CENPIQ92674 756 aaPredicted RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 C11orf84Q9BUA3 381 aaPredicted RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 SNRNP25Q9BV90 132 aaKnown RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
NPC1-214ENST00000593280 PRDM10Q9NQV6 1147 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 ADAM21Q9UKJ8 722 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 NFS1Q9Y697 457 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 PATJQ8NI35 1801 aa12.47□□□□□ -0.41
NPC1-214ENST00000593280 SGK1O00141 431 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
NPC1-214ENST00000593280 SULT1E1P49888 294 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 CDK7P50613 346 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 TKTL1P51854 596 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 CDR1P51861 262 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 FAM189BP81408 668 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 P3H1Q32P28 736 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 NOMO2Q5JPE7 1267 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
NPC1-214ENST00000593280 CLLU1OSQ5K130 101 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 RHBDF2Q6PJF5 856 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 CCDC25Q86WR0 208 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 VSIG1Q86XK7 387 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 OR2W6PQ8NHA6 318 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 FAM76AQ8TAV0 307 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.46□□□□□ -0.41
NPC1-214ENST00000593280 MYLPFQ96A32 169 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 EXOC4Q96A65 974 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 ARL8AQ96BM9 186 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 SUSD3Q96L08 255 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 SMOQ99835 787 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 ACBD6Q9BR61 282 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 TMEM121Q9BTD3 319 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 GPATCH2LQ9NWQ4 482 aa12.46□□□□□ -0.41
NPC1-214ENST00000593280 TANC1Q9C0D5 1861 aa12.46□□□□□ -0.42
NPC1-214ENST00000593280 NLRC5Q86WI3 1866 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 NDC80O14777 642 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 MCF2LO15068 1137 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 TP73O15350 636 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 MYZAPP0CAP1 466 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 RARGP13631 454 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 TYMPP19971 482 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 EIF3EP60228 445 aaKnown RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 YWHAZP63104 245 aaKnown RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 IFFO1Q0D2I5 559 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 SLC25A52Q3SY17 297 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 ERMARDQ5T6L9 678 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 OVOS1Q6IE37 1185 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 STRADAQ7RTN6 431 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 PRUNE1Q86TP1 453 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 FAM126BQ8IXS8 530 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 DEFB106AQ8N104 65 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 THEM5Q8N1Q8 247 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 NDRG1Q92597 394 aaKnown RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 RNF157Q96PX1 679 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 ZNF670Q9BS34 389 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 SAE1Q9UBE0 346 aaPredicted RBP12.45□□□□□ -0.42
NPC1-214ENST00000593280 STAP1Q9ULZ2 295 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 PTPRDP23468 1912 aa12.45□□□□□ -0.42
NPC1-214ENST00000593280 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 APOL1O14791 398 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 ITGB1P05556 798 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 NUDT17P0C025 328 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 PECAM1P16284 738 aaPredicted RBP12.44□□□□□ -0.42
NPC1-214ENST00000593280 NOS2P35228 1153 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 NDUFV1P49821 464 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 TSPY1Q01534 308 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
NPC1-214ENST00000593280 DSC1Q08554 894 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 GPS1Q13098 491 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 CA9Q16790 459 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 DCAF6Q58WW2 860 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 TRMT10CQ7L0Y3 403 aaKnown RBP12.44□□□□□ -0.42
NPC1-214ENST00000593280 GLIS1Q8NBF1 620 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 P3H4Q92791 437 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 PKNOX2Q96KN3 472 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
NPC1-214ENST00000593280 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms