RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 BHMTQ93088 406 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 JAKMIP2Q96AA8 810 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SPACA7Q96KW9 195 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 MED10Q9BTT4 135 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 XYLT2Q9H1B5 865 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 EVLQ9UI08 416 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 PILRBQ9UKJ0 227 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 NUDT5Q9UKK9 219 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 CYP8B1Q9UNU6 501 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 SH3BP1Q9Y3L3 701 aa11.9□□□□□ -0.5
PRKCSH-220ENST00000593104 A0A1W2PQF6 199 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 WASH3PC4AMC7 463 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 TAF4O00268 1085 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 TACC1O75410 805 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 HOXB2P14652 356 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 MAOBP27338 520 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 GAD2Q05329 585 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 PSMD6Q15008 389 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 SURF1Q15526 300 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC23A3Q6PIS1 610 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 TPGS1Q6ZTW0 290 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 GPRIN1Q7Z2K8 1008 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 ACOT1Q86TX2 421 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 SMOQ99835 787 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 ELOVL4Q9GZR5 314 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 OSER1Q9NX31 292 aa11.89□□□□□ -0.51
PRKCSH-220ENST00000593104 A0A0A0MRY4 1105 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 IGHV1OR15-9A0A0B4J2B8 117 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 PRRT4C9JH25 899 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 NEDD8-MDP1E9PL57 170 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 GREM1O60565 184 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 PFKLP17858 780 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 NDUFV2P19404 249 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 EIF2DP41214 584 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 TNFRSF4P43489 277 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 RING1Q06587 406 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 ZNF33AQ06730 810 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 LMAN2Q12907 356 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 SEMA3BQ13214 749 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 TRPC3Q13507 836 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 HECTD3Q5T447 861 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 SPOPLQ6IQ16 392 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 FUKQ8N0W3 1084 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 MINDY1Q8N5J2 469 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 TERB1Q8NA31 727 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 HSPA12BQ96MM6 686 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 CD248Q9HCU0 757 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 SPHK2Q9NRA0 654 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 FAM49BQ9NUQ9 324 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 DNAJC17Q9NVM6 304 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 KBTBD4Q9NVX7 518 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 CACNA2D2Q9NY47 1150 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 PLK2Q9NYY3 685 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 TBC1D14Q9P2M4 693 aa11.88□□□□□ -0.51
PRKCSH-220ENST00000593104 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 KIAA0391O15091 583 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 HOXC11O43248 304 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 PHACTR2O75167 634 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 AP1G2O75843 785 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 VNN1O95497 513 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 ADORA2BP29275 332 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 PPP3CCP48454 512 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 DLG4P78352 724 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 BIRC3Q13489 604 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 STK38Q15208 465 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 PEAR1Q5VY43 1037 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 BTBD8Q5XKL5 378 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 PNPLA1Q8N8W4 532 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 C12orf29Q8N999 325 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 LINC00301Q8NCQ3 95 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 NACA2Q9H009 215 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 SLC32A1Q9H598 525 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 CAPN10Q9HC96 672 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 DEC1Q9P2X7 70 aa11.87□□□□□ -0.51
PRKCSH-220ENST00000593104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 EIF3DO15371 548 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCSH-220ENST00000593104 CYP26A1O43174 497 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms