RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 DCDC2BA2VCK2 349 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 K7EQS6 105 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 APODP05090 189 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 IRF1P10914 325 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 ADH5P11766 374 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 CD58P19256 250 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 TUBP50607 506 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 PPP3CAQ08209 521 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 BTBD8Q5XKL5 378 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 RHBDF2Q6PJF5 856 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 C12orf50Q8NA57 414 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-241ENST00000593048 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 CYFIP2Q96F07 1278 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 APOBEC3GQ9HC16 384 aaKnown RBP17.07■□□□□ 0.32
CIRBP-241ENST00000593048 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 CSNK1G1Q9HCP0 422 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 EBF1Q9UH73 591 aa17.07■□□□□ 0.32
CIRBP-241ENST00000593048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 TLR5O60602 858 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 LETM1O95202 739 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 EIF2DP41214 584 aaKnown RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 MRPS21P82921 87 aaKnown RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 GAD2Q05329 585 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 ENPEPQ07075 957 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 ELF2Q15723 593 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 GAB4Q2WGN9 574 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 KRT39Q6A163 491 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 SMYD4Q8IYR2 804 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 CCDC33Q8N5R6 958 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 HNRNPABQ99729 332 aaKnown RBP17.06■□□□□ 0.32
CIRBP-241ENST00000593048 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 RMND1Q9NWS8 449 aa17.06■□□□□ 0.32
CIRBP-241ENST00000593048 ACACBO00763 2458 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 FAM92AA1XBS5 289 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 CETN3O15182 167 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 STX10O60499 249 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 RHOBTB1O94844 696 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 EPN2O95208 641 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 KAT7O95251 611 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 ZDHHC11BP0C7U3 371 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 GBP1P32455 592 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 GTF2H1P32780 548 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 KDSRQ06136 332 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 GOLGA8FQ08AF8 430 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 GOLGA8DPQ0D2H9 430 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 PNOCQ13519 176 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 CCDC6Q16204 474 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 ANO4Q32M45 955 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 PREPLQ4J6C6 727 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 USP39Q53GS9 565 aaKnown RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 CLEC20AQ6ZU45 233 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 EEF2KMTQ96G04 330 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 ZC3H10Q96K80 434 aaKnown RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 TWNKQ96RR1 684 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 MMP17Q9ULZ9 603 aa17.05■□□□□ 0.32
CIRBP-241ENST00000593048 KMT2BQ9UMN6 2715 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-241ENST00000593048 HELZP42694 1942 aaKnown RBP17.04■□□□□ 0.32
CIRBP-241ENST00000593048 GDF9O60383 454 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 CILPO75339 1184 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 ALDH1A2O94788 518 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 TIE1P35590 1138 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 ATP5C1P36542 298 aaKnown RBP17.04■□□□□ 0.32
CIRBP-241ENST00000593048 GRIA2P42262 883 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 PLK5Q496M5 336 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 ZNF394Q53GI3 561 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 ANO7Q6IWH7 933 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 NUDT18Q6ZVK8 323 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 C12orf40Q86WS4 652 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 BBS7Q8IWZ6 715 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 NAT16Q8N8M0 369 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
CIRBP-241ENST00000593048 TSG101Q99816 390 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 TPSD1Q9BZJ3 242 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 LSM7Q9UK45 103 aaKnown RBP17.04■□□□□ 0.32
CIRBP-241ENST00000593048 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 INVSQ9Y283 1065 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 PCDHGA5Q9Y5G8 931 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 PCDHA5Q9Y5H7 936 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 ATG2BQ96BY7 2078 aa17.04■□□□□ 0.32
CIRBP-241ENST00000593048 TBC1D3BA6NDS4 549 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 SLC30A4O14863 429 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 DCLK1O15075 740 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 CYP26A1O43174 497 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 SMC2O95347 1197 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 KLF8O95600 359 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 TBX18O95935 607 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 ZNF806P0C7X5 589 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 TNFRSF4P43489 277 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms