RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 MYLK4Q86YV6 388 aaPredicted RBP15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 PHC3Q8NDX5 983 aa15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 RAB3IL1Q8TBN0 382 aa15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 WWP1Q9H0M0 922 aa15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 PDP2Q9P2J9 529 aa15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 TAGLN3Q9UI15 199 aa15.46■□□□□ 0.06
SMARCA4-219ENST00000592604 H3BRJ5 948 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 TOM1L1O75674 476 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 PRKCHP24723 683 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 CPA2P48052 419 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 RBBP5Q15291 538 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 TEX44Q53QW1 395 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 SLC4A11Q8NBS3 891 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 CPXM1Q96SM3 734 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 SUDS3Q9H7L9 328 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 USP18Q9UMW8 372 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 RLFQ13129 1914 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 WNT10BO00744 389 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 AVILO75366 819 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 RFPL1O75677 317 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 ENO1P06733 434 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 GCLCP48506 637 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 OAZ1P54368 228 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 ACTR3P61158 418 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 YWHAZP63104 245 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 TBCCQ15814 346 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF699Q32M78 642 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 DNAL1Q4LDG9 190 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 FOXB2Q5VYV0 432 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 PPM1NQ8N819 430 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 AGBL3Q8NEM8 1001 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 FBXO27Q8NI29 283 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 HSPH1Q92598 858 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 FAF2Q96CS3 445 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 CCDC106Q9BWC9 280 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 C1orf21Q9H246 121 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 KAT6AQ92794 2004 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 BRWD3Q6RI45 1802 aa15.45■□□□□ 0.06
SMARCA4-219ENST00000592604 MSCO60682 206 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 RNF8O76064 485 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 FAM163BP0C2L3 166 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ANPEPP15144 967 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 TMPRSS15P98073 1019 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 TARBP2Q15633 366 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CES4AQ5XG92 561 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 NPNTQ6UXI9 565 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 MCRS1Q96EZ8 462 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 MECRQ9BV79 373 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CALN1Q9BXU9 219 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 PAK5Q9P286 719 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 PPARGC1AQ9UBK2 798 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CPSF3Q9UKF6 684 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 IGKV6D-21A0A0A0MT36 114 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CXorf49A8MYA2 514 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 OGTO15294 1046 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 SNNO75324 88 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ERBB2P04626 1255 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CD19P15391 556 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 C6orf163Q5TEZ5 329 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 SCARA5Q6ZMJ2 495 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CTAGE3PQ8IX95 158 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ULK2Q8IYT8 1036 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 RTP4Q96DX8 246 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 TEPSINQ96N21 525 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 PANX3Q96QZ0 392 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 FAM192AQ9GZU8 254 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 PLAC1Q9HBJ0 212 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 POPDC2Q9HBU9 364 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 GPAMQ9HCL2 828 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CIB2O75838 187 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 HOXC6P09630 235 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ICAM3P32942 547 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 MAGEA6P43360 314 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 GABRB2P47870 512 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 TFDP2Q14188 446 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 FAM47CQ5HY64 1035 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 KYAT3Q6YP21 454 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 RIPOR1Q6ZS17 1223 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 CFAP36Q96G28 342 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 TCHPQ9BT92 498 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 MRPL4Q9BYD3 311 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ASNSD1Q9NWL6 643 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF214Q9UL59 606 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
SMARCA4-219ENST00000592604 COL4A5P29400 1685 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CRABP2P29373 138 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 EFNA5P52803 228 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 MMRN1Q13201 1228 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CHI3L2Q15782 390 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 MTHFD1LQ6UB35 978 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 NUDCD3Q8IVD9 361 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 MTBPQ96DY7 904 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 PEBP4Q96S96 227 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms