RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-237ENST00000592234 MAPK13O15264 365 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 BEST1O76090 585 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 RHOBTB3O94955 611 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 ZNF202O95125 648 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 KAT7O95251 611 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 ZDHHC11BP0C7U3 371 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 NR2F2P24468 414 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 ASPAP45381 313 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 LIMK1P53667 647 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 MAP3K7CLP57077 242 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 GAD2Q05329 585 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 KDSRQ06136 332 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 CRY1Q16526 586 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 USP39Q53GS9 565 aaKnown RBP19.41■□□□□ 0.7
CIRBP-237ENST00000592234 PLA2G2CQ5R387 149 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 LY6G5CQ5SRR4 150 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 C1orf220Q5T0J3 134 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 ANO7Q6IWH7 933 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 C12orf40Q86WS4 652 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 C12orf29Q8N999 325 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 DDX1Q92499 740 aaKnown RBP19.41■□□□□ 0.7
CIRBP-237ENST00000592234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.41■□□□□ 0.71e-6■■■■■ 38.4
CIRBP-237ENST00000592234 ARHGEF4Q9NR80 690 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 VPS45Q9NRW7 570 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 MAPK8IP1Q9UQF2 711 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 INVSQ9Y283 1065 aa19.41■□□□□ 0.7
CIRBP-237ENST00000592234 ADRB1P08588 477 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 FAM200BP0CF97 657 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 IRF1P10914 325 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 KRT13P13646 458 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 KCNA4P22459 653 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 ADORA2BP29275 332 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 TIE1P35590 1138 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 CREB5Q02930 508 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 DPYDQ12882 1025 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 INTS8Q75QN2 995 aaKnown RBP19.4■□□□□ 0.7
CIRBP-237ENST00000592234 C11orf74Q86VG3 221 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 RASSF3Q86WH2 238 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 TTC30AQ86WT1 665 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 SFTPA1Q8IWL2 248 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 ALLCQ8N6M5 410 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 CNOT6LQ96LI5 555 aaKnown RBP19.4■□□□□ 0.7
CIRBP-237ENST00000592234 CSNK1G1Q9HCP0 422 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 TLR8Q9NR97 1041 aaKnown RBP19.4■□□□□ 0.7
CIRBP-237ENST00000592234 RXFP3Q9NSD7 469 aa19.4■□□□□ 0.7
CIRBP-237ENST00000592234 CNOT1A5YKK6 2376 aaKnown RBP19.4■□□□□ 0.7
CIRBP-237ENST00000592234 GOLGA6L4A6NEF3 574 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 TLR5O60602 858 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 ALDH1A2O94788 518 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 KLF8O95600 359 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-237ENST00000592234 TRIM49P0CI25 452 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 TRIM49CP0CI26 452 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 GRIA2P42262 883 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 GCLMP48507 274 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 MESP2Q0VG99 397 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 NFIL3Q16649 462 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 HSF5Q4G112 596 aaPredicted RBP19.39■□□□□ 0.69
CIRBP-237ENST00000592234 BTBD8Q5XKL5 378 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 BBS7Q8IWZ6 715 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 TXNDC5Q8NBS9 432 aaKnown RBP19.39■□□□□ 0.69
CIRBP-237ENST00000592234 MDGA1Q8NFP4 955 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 MMRN2Q9H8L6 949 aa19.39■□□□□ 0.69
CIRBP-237ENST00000592234 A0A0A0MRY4 1105 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 LAMA1P25391 3075 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 RPL13P26373 211 aaKnown RBP19.38■□□□□ 0.69
CIRBP-237ENST00000592234 TNFRSF4P43489 277 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 INCA1Q0VD86 236 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 ANO4Q32M45 955 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 STPG1Q5TH74 334 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 EMC10Q5UCC4 262 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 PMS2CLQ68D20 193 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 TMEM92Q6UXU6 159 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CLEC20AQ6ZU45 233 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 FAM186BQ8IYM0 893 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 GUF1Q8N442 669 aaKnown RBP19.38■□□□□ 0.69
CIRBP-237ENST00000592234 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 IL17RCQ8NAC3 791 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CCDC150Q8NCX0 1101 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 TAS1R2Q8TE23 839 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 JAKMIP2Q96AA8 810 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CYFIP2Q96F07 1278 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CNTNAP3BQ96NU0 1288 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 TWNKQ96RR1 684 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 HNRNPABQ99729 332 aaKnown RBP19.38■□□□□ 0.69
CIRBP-237ENST00000592234 NT5C1AQ9BXI3 368 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CNTNAP3Q9BZ76 1288 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CYP3A43Q9HB55 503 aa19.38■□□□□ 0.69
CIRBP-237ENST00000592234 POLMQ9NP87 494 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-237ENST00000592234 CEP192Q8TEP8 1941 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 PLXND1Q9Y4D7 1925 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 BCLAF3A2AJT9 711 aaKnown RBP19.37■□□□□ 0.69
CIRBP-237ENST00000592234 SGK1O00141 431 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 CAVIN2O95810 425 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 PSMC2P35998 433 aaKnown RBP19.37■□□□□ 0.69
CIRBP-237ENST00000592234 PGFP49763 221 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 PPP3CAQ08209 521 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 ADAM9Q13443 819 aa19.37■□□□□ 0.69
CIRBP-237ENST00000592234 PREPLQ4J6C6 727 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-237ENST00000592234 EOGTQ5NDL2 527 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms