RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 YWHAQP27348 245 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 EIF2DP41214 584 aaKnown RBP11.05□□□□□ -0.64
VPS4B-207ENST00000591519 AFMP43652 599 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 MRPS21P82921 87 aaKnown RBP11.05□□□□□ -0.64
VPS4B-207ENST00000591519 STK4Q13043 487 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 DHCR24Q15392 516 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
VPS4B-207ENST00000591519 CRYBG2Q8N1P7 616 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 PDZD8Q8NEN9 1154 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 HHIPQ96QV1 700 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 KCTD10Q9H3F6 313 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 VPS45Q9NRW7 570 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
VPS4B-207ENST00000591519 CPQQ9Y646 472 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
VPS4B-207ENST00000591519 TPRP12270 2363 aaKnown RBP11.04□□□□□ -0.64
VPS4B-207ENST00000591519 A0A1B0GVL5 298 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CLDN5O00501 218 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 IKBKBO14920 756 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 ST8SIA5O15466 376 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 PHACTR2O75167 634 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 RHOBTB1O94844 696 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 VNN1O95497 513 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CYP17A1P05093 508 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 MYL1P05976 194 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 ZDHHC11BP0C7U3 371 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CASP4P49662 377 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 TUBP50607 506 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CDH8P55286 799 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 FOXC1Q12948 553 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 NCOA4Q13772 614 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 SF3A2Q15428 464 aaKnown RBP11.04□□□□□ -0.64
VPS4B-207ENST00000591519 SGSM1Q2NKQ1 1148 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 ZACNQ401N2 412 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 HSF5Q4G112 596 aaPredicted RBP11.04□□□□□ -0.64
VPS4B-207ENST00000591519 ZNF667Q5HYK9 610 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 PPM1JQ5JR12 505 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 C11orf74Q86VG3 221 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 GRAMD1CQ8IYS0 662 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CEP57L1Q8IYX8 460 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 OTUB2Q96DC9 234 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 PAGE5Q96GU1 130 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 TNIP3Q96KP6 325 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 KCNK16Q96T55 309 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 SERTAD1Q9UHV2 236 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 MMP17Q9ULZ9 603 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 KIAA1549LQ6ZVL6 1849 aa11.04□□□□□ -0.64
VPS4B-207ENST00000591519 CNOT1A5YKK6 2376 aaKnown RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 BCLAF3A2AJT9 711 aaKnown RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 LRRIQ3A6PVS8 624 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 PDXKO00764 312 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 COCHO43405 550 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 ABL1P00519 1130 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CMA1P23946 247 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 MPLP40238 635 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 DGKEP52429 567 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 ELF2Q15723 593 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CRY1Q16526 586 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 USP39Q53GS9 565 aaKnown RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 HECTD3Q5T447 861 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 FUKQ8N0W3 1084 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 KIAA0895Q8NCT3 520 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 TTC16Q8NEE8 873 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 SCAMP5Q8TAC9 235 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 TAF4BQ92750 862 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 PNKPQ96T60 521 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 RXFP3Q9NSD7 469 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
VPS4B-207ENST00000591519 MYOFQ9NZM1 2061 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 ABCA7Q8IZY2 2146 aa11.03□□□□□ -0.64
VPS4B-207ENST00000591519 ANTXRLA6NF34 631 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 DCLK1O15075 740 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 MAPK13O15264 365 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 KAT7O95251 611 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 ADH1CP00326 375 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 MBL2P11226 248 aaPredicted RBP11.02□□□□□ -0.65
VPS4B-207ENST00000591519 PFKFB1P16118 471 aa11.02□□□□□ -0.65
VPS4B-207ENST00000591519 KIR2DL1P43626 348 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms