RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SGK1O00141 431 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 ALDH1A2O94788 518 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 BCKDHBP21953 392 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 TNFRSF4P43489 277 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 KIR2DL1P43626 348 aaPredicted RBP23.04■■□□□ 1.28
DDX39A-215ENST00000590696 TUBP50607 506 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 MAP3K7CLP57077 242 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 HSF5Q4G112 596 aaPredicted RBP23.04■■□□□ 1.28
DDX39A-215ENST00000590696 N4BP2L1Q5TBK1 243 aaPredicted RBP23.04■■□□□ 1.28
DDX39A-215ENST00000590696 CEP135Q66GS9 1140 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 SPOPLQ6IQ16 392 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 NAT16Q8N8M0 369 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 TAF4BQ92750 862 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 EDEM2Q9BV94 578 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 CSNK1G1Q9HCP0 422 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 ZDHHC4Q9NPG8 344 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 USP25Q9UHP3 1055 aa23.04■■□□□ 1.28
DDX39A-215ENST00000590696 IRF1P10914 325 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 CHRM1P11229 460 aaPredicted RBP23.03■■□□□ 1.28
DDX39A-215ENST00000590696 CMA1P23946 247 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 EOGTQ5NDL2 527 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 BTBD8Q5XKL5 378 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 UNC93AQ86WB7 457 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 BBS7Q8IWZ6 715 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 C12orf29Q8N999 325 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 WBP2Q969T9 261 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 LSM14BQ9BX40 385 aaKnown RBP23.03■■□□□ 1.28
DDX39A-215ENST00000590696 NACA2Q9H009 215 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 POLMQ9NP87 494 aaPredicted RBP23.03■■□□□ 1.28
DDX39A-215ENST00000590696 FAM49BQ9NUQ9 324 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 FRMD4BQ9Y2L6 1034 aa23.03■■□□□ 1.28
DDX39A-215ENST00000590696 LAMA1P25391 3075 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 IKBKBO14920 756 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 CALUO43852 315 aaPredicted RBP23.02■■□□□ 1.28
DDX39A-215ENST00000590696 ASS1P00966 412 aaKnown RBP23.02■■□□□ 1.28
DDX39A-215ENST00000590696 HLA-DRAP01903 254 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 MYL1P05976 194 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 PIK3CAP42336 1068 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 ASPAP45381 313 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 PGFP49763 221 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 C1orf220Q5T0J3 134 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 PHTF2Q8N3S3 785 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 OLIG1Q8TAK6 271 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 FBXO44Q9H4M3 255 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.02■■□□□ 1.283e-6■■■■■ 28.8
DDX39A-215ENST00000590696 SPHK2Q9NRA0 654 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 HPSEQ9Y251 543 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 ABCA7Q8IZY2 2146 aa23.02■■□□□ 1.28
DDX39A-215ENST00000590696 TBC1D3BA6NDS4 549 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 HOXC11O43248 304 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 TLR5O60602 858 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 ADORA2BP29275 332 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 DHPSP49366 369 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 ANO4Q32M45 955 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 CYP2U1Q7Z449 544 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 TMEM25Q86YD3 366 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 ETFBKMTQ8IXQ9 262 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 RLN3Q8WXF3 142 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 CHAMP1Q96JM3 812 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 DUSP9Q99956 384 aaKnown RBP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 TLR8Q9NR97 1041 aaKnown RBP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 BCCIPQ9P287 314 aaKnown RBP eCLIP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 DEC1Q9P2X7 70 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 CIZ1Q9ULV3 898 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-215ENST00000590696 TRAF3IP3Q9Y228 551 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 THADAQ6YHU6 1953 aa23.01■■□□□ 1.27
DDX39A-215ENST00000590696 LNP1A1A4G5 178 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 C4orf47A7E2U8 309 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 KHNYNO15037 678 aaKnown RBP23■■□□□ 1.27
DDX39A-215ENST00000590696 ADAM23O75077 832 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 TULP3O75386 442 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 KCNK5O95279 499 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 P2RY2P41231 377 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 VAMP7P51809 220 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 WHAMMQ8TF30 809 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 SPATA32Q96LK8 384 aa23■■□□□ 1.27
DDX39A-215ENST00000590696 NUP205Q92621 2012 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 PATE3B3GLJ2 98 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 KRT37O76014 449 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 KIF20AO95235 890 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 TBX18O95935 607 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 PRR29P0C7W0 189 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 FAM200BP0CF97 657 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 TRIM21P19474 475 aaKnown RBP22.99■■□□□ 1.27
DDX39A-215ENST00000590696 PMLP29590 882 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 PREPLQ4J6C6 727 aaPredicted RBP22.99■■□□□ 1.27
DDX39A-215ENST00000590696 CLEC20AQ6ZU45 233 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 HTR3DQ70Z44 454 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 GPRIN1Q7Z2K8 1008 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 PGBD3Q8N328 593 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 FRMD1Q8N878 549 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 HMGB4Q8WW32 186 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 JAKMIP2Q96AA8 810 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 TWNKQ96RR1 684 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 HNRNPABQ99729 332 aaKnown RBP22.99■■□□□ 1.27
DDX39A-215ENST00000590696 KLF16Q9BXK1 252 aaPredicted RBP22.99■■□□□ 1.27
DDX39A-215ENST00000590696 ANGPTL2Q9UKU9 493 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 MYH10P35580 1976 aa22.99■■□□□ 1.27
DDX39A-215ENST00000590696 TPRP12270 2363 aaKnown RBP22.98■■□□□ 1.27
DDX39A-215ENST00000590696 TCRBV21S2A2A0A5A6 115 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms