RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
PDE4A-207ENST00000590407 TEX44Q53QW1 395 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 EMC1Q8N766 993 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 CCDC110Q8TBZ0 833 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 TBCBQ99426 244 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 WWP1Q9H0M0 922 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 VCXQ9H320 206 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 C12orf65Q9H3J6 166 aaKnown RBP12.88□□□□□ -0.35
PDE4A-207ENST00000590407 FBXO6Q9NRD1 293 aaPredicted RBP12.88□□□□□ -0.35
PDE4A-207ENST00000590407 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
PDE4A-207ENST00000590407 DPPA5A6NC42 116 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 TRIM49D1C9J1S8 452 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 H0Y3Z8 333 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 AHCYL1O43865 530 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 RFPL1O75677 317 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 KRT38O76015 456 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 STAU1O95793 577 aaKnown RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 CNTFP26441 200 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 CDH6P55285 790 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 GSTA3Q16772 222 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 TRMT5Q32P41 509 aaKnown RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 BOLA3Q53S33 107 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 NOL9Q5SY16 702 aaKnown RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 ATF7IP2Q5U623 682 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 LRRC74BQ6ZQY2 392 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 ARCQ7LC44 396 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 NET1Q7Z628 596 aaPredicted RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 HSPH1Q92598 858 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 STMN2Q93045 179 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 TMEM176AQ96HP8 235 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 ADPGKQ9BRR6 497 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 CALN1Q9BXU9 219 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 NFKBIZQ9BYH8 718 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 NMUR2Q9GZQ4 415 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 C1orf21Q9H246 121 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 STN1Q9H668 368 aaKnown RBP12.87□□□□□ -0.35
PDE4A-207ENST00000590407 PCSK1NQ9UHG2 260 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 TNFSF13BQ9Y275 285 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 ASB3Q9Y575 518 aa12.87□□□□□ -0.35
PDE4A-207ENST00000590407 FAM159BA6NKW6 160 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CAPN9O14815 690 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 KRT36O76013 467 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 APOEP02649 317 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 NEFHP12036 1026 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 P4HA1P13674 534 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TPSB2P20231 275 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 OSBPP22059 807 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CRHR1P34998 444 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 INCA1Q0VD86 236 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 STILQ15468 1287 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TAF5Q15542 800 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TPSAB1Q15661 275 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CAND1Q86VP6 1230 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PLD5Q8N7P1 536 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PPFIBP2Q8ND30 876 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 RPF1Q9H9Y2 349 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PLAC1Q9HBJ0 212 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 NXF1Q9UBU9 619 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ZC3H7BQ9UGR2 993 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 H7C0C1 242 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 APOL1O14791 398 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TBX10O75333 385 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CSDE1O75534 798 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PIAS1O75925 651 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TM7SF2O76062 418 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 DPEP1P16444 411 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 CDC25CP30307 473 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 PGM1P36871 562 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 ATP5OP48047 213 aa12.86□□□□□ -0.35
PDE4A-207ENST00000590407 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
PDE4A-207ENST00000590407 POU5F1BQ06416 359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms