RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 IMPG2Q9BZV3 1241 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 SMOC1Q9H4F8 434 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 TLR8Q9NR97 1041 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 FAM49BQ9NUQ9 324 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 TRAF3IP3Q9Y228 551 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 INVSQ9Y283 1065 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 NUP205Q92621 2012 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 CHD8Q9HCK8 2581 aa18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 MYO18AQ92614 2054 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-211ENST00000590098 FAM92AA1XBS5 289 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 KLF8O95600 359 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 HLA-DRAP01903 254 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 ZDHHC11BP0C7U3 371 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 FAM200BP0CF97 657 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 NR2F2P24468 414 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 TIE1P35590 1138 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 GRIA2P42262 883 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 TNFRSF4P43489 277 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 KDSRQ06136 332 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 HSF5Q4G112 596 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 PREPLQ4J6C6 727 aaPredicted RBP18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 STPG1Q5TH74 334 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 SPOPLQ6IQ16 392 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 RASSF3Q86WH2 238 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 C12orf40Q86WS4 652 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 ALLCQ8N6M5 410 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 C12orf29Q8N999 325 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 TXNDC5Q8NBS9 432 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 ZMIZ2Q8NF64 920 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 ZFRQ96KR1 1074 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 SMOQ99835 787 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 DNAI2Q9GZS0 605 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 CSNK1G1Q9HCP0 422 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 HMGXB4Q9UGU5 601 aa18.98■□□□□ 0.63
PRKCSH-211ENST00000590098 A0A0A0MRY4 1105 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 MAPK13O15264 365 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 TLR5O60602 858 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 BEST1O76090 585 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 RHOBTB3O94955 611 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 CAVIN2O95810 425 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 IRF1P10914 325 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 KRT13P13646 458 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 RPL13P26373 211 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 ADORA2BP29275 332 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 ASPAP45381 313 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 NDUFA8P51970 172 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 EOGTQ5NDL2 527 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 C1orf220Q5T0J3 134 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 NUDT18Q6ZVK8 323 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 INTS8Q75QN2 995 aaKnown RBP18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 SFTPA1Q8IWL2 248 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 POLMQ9NP87 494 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.633e-6■■■■■ 28.8
PRKCSH-211ENST00000590098 MAPK8IP1Q9UQF2 711 aa18.97■□□□□ 0.63
PRKCSH-211ENST00000590098 BCLAF3A2AJT9 711 aaKnown RBP18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 TBC1D3BA6NDS4 549 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 TM4SF5O14894 197 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 PRR29P0C7W0 189 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 MESP2Q0VG99 397 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 NFIL3Q16649 462 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 ANO4Q32M45 955 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 RNF43Q68DV7 783 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 TMEM92Q6UXU6 159 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 BBS7Q8IWZ6 715 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 FAM186BQ8IYM0 893 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 NAT16Q8N8M0 369 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 IL17RCQ8NAC3 791 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 CCDC150Q8NCX0 1101 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 MDGA1Q8NFP4 955 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 DUSP9Q99956 384 aaKnown RBP18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 CYP3A43Q9HB55 503 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 SPHK2Q9NRA0 654 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 DEC1Q9P2X7 70 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 ATP6V1DQ9Y5K8 247 aa18.96■□□□□ 0.63
PRKCSH-211ENST00000590098 CACNA1BQ00975 2339 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 SGK1O00141 431 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 HOXC11O43248 304 aaPredicted RBP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TRIM49P0CI25 452 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TRIM49CP0CI26 452 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 PSMC2P35998 433 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 ATP5C1P36542 298 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 KIR2DL1P43626 348 aaPredicted RBP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 GCLMP48507 274 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 INCA1Q0VD86 236 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 DPYDQ12882 1025 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 EMC10Q5UCC4 262 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 PMS2CLQ68D20 193 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TCEAL6Q6IPX3 200 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TMEM25Q86YD3 366 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TCEAL3Q969E4 200 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 JAKMIP2Q96AA8 810 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 CYFIP2Q96F07 1278 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 CHAMP1Q96JM3 812 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 HNRNPABQ99729 332 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 NT5C1AQ9BXI3 368 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 SCAND2PQ9GZW5 306 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms