RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 ZCWPW2Q504Y3 356 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 KRT39Q6A163 491 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 KBTBD6Q86V97 674 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 TSTD1Q8NFU3 115 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 ZFRQ96KR1 1074 aaKnown RBP15.18■□□□□ 0.02
MBD1-220ENST00000589758 CCSER2Q9H7U1 834 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 PNPLA8Q9NP80 782 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 FAM49BQ9NUQ9 324 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 POLR3BQ9NW08 1133 aaPredicted RBP15.18■□□□□ 0.02
MBD1-220ENST00000589758 RMND1Q9NWS8 449 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 HMGXB4Q9UGU5 601 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 PCDHGA5Q9Y5G8 931 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 DCHS1Q96JQ0 3298 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 MYO16Q9Y6X6 1858 aa15.18■□□□□ 0.02
MBD1-220ENST00000589758 MYH10P35580 1976 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.17■□□□□ 0.02
MBD1-220ENST00000589758 SLC30A4O14863 429 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 STX10O60499 249 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 TLR5O60602 858 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 ADORA2BP29275 332 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 SEC13P55735 322 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 ELF2Q15723 593 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 BTBD8Q5XKL5 378 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 CLEC20AQ6ZU45 233 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 C11orf74Q86VG3 221 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 TTC39CQ8N584 583 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 C12orf50Q8NA57 414 aaPredicted RBP15.17■□□□□ 0.02
MBD1-220ENST00000589758 ARRDC1-AS1Q9H2J1 176 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 MMRN2Q9H8L6 949 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 APOBEC3GQ9HC16 384 aaKnown RBP15.17■□□□□ 0.02
MBD1-220ENST00000589758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■■■■ 96.1
MBD1-220ENST00000589758 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 SCML2Q9UQR0 700 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
MBD1-220ENST00000589758 SCAMP3O14828 347 aaKnown RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 CETN3O15182 167 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 CILPO75339 1184 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 RHOBTB1O94844 696 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 KAT7O95251 611 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 ZNF806P0C7X5 589 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 ATP5C1P36542 298 aaKnown RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 GRIA2P42262 883 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 SLC6A11P48066 632 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 DGKEP52429 567 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 GOLGA8FQ08AF8 430 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 GOLGA8DPQ0D2H9 430 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 CRY1Q16526 586 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 PLK5Q496M5 336 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 USP39Q53GS9 565 aaKnown RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 NUDT18Q6ZVK8 323 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 FBXL13Q8NEE6 735 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 ERCC4Q92889 916 aaPredicted RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 TWNKQ96RR1 684 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 TSG101Q99816 390 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 GTPBP4Q9BZE4 634 aaKnown RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 FAM124BQ9H5Z6 455 aaPredicted RBP15.16■□□□□ 0.02
MBD1-220ENST00000589758 CYLDQ9NQC7 956 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 ARHGEF4Q9NR80 690 aa15.16■□□□□ 0.02
MBD1-220ENST00000589758 EML5Q05BV3 1969 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 HHLA1C9JL84 531 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 HOXC11O43248 304 aaPredicted RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 ALDH1A2O94788 518 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 CD58P19256 250 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 PSEN1P49768 467 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 MXI1P50539 228 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 LIMK1P53667 647 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 UBE2HP62256 183 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 AASDHQ4L235 1098 aaPredicted RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 COBLL1Q53SF7 1204 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 EOGTQ5NDL2 527 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 LY6G5CQ5SRR4 150 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 ZNF658Q5TYW1 1059 aaPredicted RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 KLHDC10Q6PID8 442 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 HTR3DQ70Z44 454 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 TADA2BQ86TJ2 420 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 RASSF3Q86WH2 238 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 BBS7Q8IWZ6 715 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 WHAMMQ8TF30 809 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 CNOT6LQ96LI5 555 aaKnown RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 GSDMAQ96QA5 445 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 DUSP15Q9H1R2 295 aaPredicted RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 SPHK2Q9NRA0 654 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 RAB20Q9NX57 234 aa15.15■□□□□ 0.02
MBD1-220ENST00000589758 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 LSM7Q9UK45 103 aaKnown RBP15.15■□□□□ 0.02
MBD1-220ENST00000589758 DCDC2BA2VCK2 349 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 SMC2O95347 1197 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 IRF1P10914 325 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 TIE1P35590 1138 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 KIF11P52732 1056 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 GPRIN1Q7Z2K8 1008 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 C12orf40Q86WS4 652 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 ZNF276Q8N554 614 aa15.14■□□□□ 0.01
MBD1-220ENST00000589758 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms