RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TERB1Q8NA31 727 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 OVCA2Q8WZ82 227 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 HSPA12BQ96MM6 686 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 MED10Q9BTT4 135 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 FGFBP2Q9BYJ0 223 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 ZNF518BQ9C0D4 1074 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 CAPN10Q9HC96 672 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 SPHK2Q9NRA0 654 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 HSPBP1Q9NZL4 362 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 CYP8B1Q9UNU6 501 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 CLIC4Q9Y696 253 aa16.18■□□□□ 0.18
ACTN4-211ENST00000589528 DSPP15924 2871 aaKnown RBP16.18■□□□□ 0.18
ACTN4-211ENST00000589528 CLDN5O00501 218 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 HOXC11O43248 304 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-211ENST00000589528 TACC1O75410 805 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 IRF1P10914 325 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 CACNA2D1P54289 1103 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 TRPC3Q13507 836 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 PLEKHG6Q3KR16 790 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 SYCP2LQ5T4T6 812 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 GRAMD4Q6IC98 578 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 CHPFQ8IZ52 775 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 PHTF2Q8N3S3 785 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 TRIML1Q8N9V2 468 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 RDH13Q8NBN7 331 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 B3GALNT2Q8NCR0 500 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 OR2I1PQ8NGU4 316 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 SCFD1Q8WVM8 642 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 ERLEC1Q96DZ1 483 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 PANK2Q9BZ23 570 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 DPEP3Q9H4B8 488 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 SUSD2Q9UGT4 822 aa16.17■□□□□ 0.18
ACTN4-211ENST00000589528 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-211ENST00000589528 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-211ENST00000589528 SRPRBQ9Y5M8 271 aaKnown RBP16.17■□□□□ 0.18
ACTN4-211ENST00000589528 FREM2Q5SZK8 3169 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 IGHV1OR15-9A0A0B4J2B8 117 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 GNSP15586 552 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 FAM193AP78312 1265 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 CEBPZQ03701 1054 aaKnown RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 TRIP6Q15654 476 aaKnown RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 PROSER1Q86XN7 944 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 BBS7Q8IWZ6 715 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 ETFBKMTQ8IXQ9 262 aa16.16■□□□□ 0.18
ACTN4-211ENST00000589528 XPO6Q96QU8 1125 aaKnown RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 FAM124BQ9H5Z6 455 aaPredicted RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 DNAJC17Q9NVM6 304 aaKnown RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 NXF1Q9UBU9 619 aaKnown RBP16.16■□□□□ 0.18
ACTN4-211ENST00000589528 ANKRD11Q6UB99 2663 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 NEDD8-MDP1E9PL57 170 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 CD2BP2O95400 341 aaKnown RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 FAM163BP0C2L3 166 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 TUBP50607 506 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 SLC5A3P53794 718 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 SLC14A1Q13336 389 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 SNRNP35Q16560 246 aaKnown RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 EGFLAMQ63HQ2 1017 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 RAB44Q7Z6P3 723 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 TMEM25Q86YD3 366 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 PDILTQ8N807 584 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 FOXJ1Q92949 421 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 CCDC127Q96BQ5 260 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 ZFRQ96KR1 1074 aaKnown RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 CGRRF1Q99675 332 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 CCSER2Q9H7U1 834 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 TMEM30AQ9NV96 361 aa16.15■□□□□ 0.18
ACTN4-211ENST00000589528 DNAAF2Q9NVR5 837 aaKnown RBP16.15■□□□□ 0.18
ACTN4-211ENST00000589528 SH3BP5O60239 455 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 PHACTR2O75167 634 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 CD59P13987 128 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 NDUFV2P19404 249 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 CYP2J2P51589 502 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 GOLGA8FQ08AF8 430 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 GOLGA8DPQ0D2H9 430 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 WDR45BQ5MNZ6 344 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 KIAA1324Q6UXG2 1013 aaKnown RBP16.14■□□□□ 0.17
ACTN4-211ENST00000589528 SLC41A1Q8IVJ1 513 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 SCAMP5Q8TAC9 235 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 IPO4Q8TEX9 1081 aaKnown RBP16.14■□□□□ 0.17
ACTN4-211ENST00000589528 SYAP1Q96A49 352 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-211ENST00000589528 CAMK1GQ96NX5 476 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 KCNK16Q96T55 309 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 BBS2Q9BXC9 721 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 DMAP1Q9NPF5 467 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-211ENST00000589528 GMIPQ9P107 970 aa16.14■□□□□ 0.17
ACTN4-211ENST00000589528 NBEAQ8NFP9 2946 aa16.13■□□□□ 0.17
ACTN4-211ENST00000589528 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
ACTN4-211ENST00000589528 FAM221BA6H8Z2 402 aa16.13■□□□□ 0.17
ACTN4-211ENST00000589528 MEI4A8MW99 385 aa16.13■□□□□ 0.17
ACTN4-211ENST00000589528 TRIM24O15164 1050 aa16.13■□□□□ 0.17
ACTN4-211ENST00000589528 PDCP20941 246 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms