RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 NECAB3Q96P71 396 aaPredicted RBP22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 LHX5Q9H2C1 402 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 SLITRK6Q9H5Y7 841 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 PNPLA8Q9NP80 782 aa22.38■■□□□ 1.17
R3HDM4-204ENST00000589428 C19orf67A6NJJ6 358 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 RTN2O75298 545 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 GJA1P17302 382 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 USP46P62068 366 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 TEAD2Q15562 447 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 GAREM2Q75VX8 874 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 TTC30AQ86WT1 665 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 GJD3Q8N144 294 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 TTLL2Q9BWV7 592 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 LACRTQ9GZZ8 138 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 IL21Q9HBE4 155 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 LUC7LQ9NQ29 371 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 GDE1Q9NZC3 331 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 FTLP02792 175 aaPredicted RBP22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 VCANP13611 3396 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 MSNP26038 577 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 BST2Q10589 180 aaKnown RBP22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 PKDCCQ504Y2 493 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 ACAD10Q6JQN1 1059 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 ZDHHC14Q8IZN3 488 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 TMEM35BQ8NCS4 154 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 UBA3Q8TBC4 463 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 SLITRK1Q96PX8 696 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 EPS15L1Q9UBC2 864 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 CYTH4Q9UIA0 394 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 CEP83Q9Y592 693 aa22.37■■□□□ 1.17
R3HDM4-204ENST00000589428 PATJQ8NI35 1801 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 MOSPD3O75425 235 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 ABL1P00519 1130 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 H2AFZP0C0S5 128 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 SETSIPP0DME0 302 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 LAMP2P13473 410 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 YWHAQP27348 245 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 ARHGAP25P42331 645 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 GPD2P43304 727 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 NSFP46459 744 aaKnown RBP22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 GALCP54803 685 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 H2AFVQ71UI9 128 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 MRPS31Q92665 395 aaKnown RBP22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 MCRS1Q96EZ8 462 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 COMMD8Q9NX08 183 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 TRIM10Q9UDY6 481 aa22.36■■□□□ 1.17
R3HDM4-204ENST00000589428 GREB1Q4ZG55 1949 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 ESPNB1AK53 854 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 TNFRSF10BO14763 440 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 CYP4F8P98187 520 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 SECISBP2LQ93073 1101 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 FBXO32Q969P5 355 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 FBXO44Q9H4M3 255 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 ZMYM5Q9UJ78 669 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 DOCK8Q8NF50 2099 aa22.35■■□□□ 1.17
R3HDM4-204ENST00000589428 NRG2O14511 850 aaPredicted RBP22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 XPO1O14980 1071 aaKnown RBP22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 PJA2O43164 708 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 CCP110O43303 1012 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 F11P03951 625 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 ABCB4P21439 1286 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 PDE4CQ08493 712 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 GPR158Q5T848 1215 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 MON1BQ7L1V2 547 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 PIGZQ86VD9 579 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 PHF13Q86YI8 300 aaPredicted RBP22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 SCAMP5Q8TAC9 235 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 LZTFL1Q9NQ48 299 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 TRPM5Q9NZQ8 1165 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 INTUQ9ULD6 942 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 HHLA1C9JL84 531 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 TADA3O75528 432 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 DDX6P26196 483 aaKnown RBP eCLIP22.34■■□□□ 1.173e-17■■□□□ 13.5
R3HDM4-204ENST00000589428 TAF10Q12962 218 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 ZNF662Q6ZS27 426 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 GPRIN1Q7Z2K8 1008 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 TMEM150AQ86TG1 271 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 PDZD8Q8NEN9 1154 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 UBXN6Q9BZV1 441 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 THAP2Q9H0W7 228 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 DUSP10Q9Y6W6 482 aa22.34■■□□□ 1.17
R3HDM4-204ENST00000589428 ANKRD62A6NC57 917 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 TULP2O00295 520 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 MMP8P22894 467 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 PPP3CCP48454 512 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 KIF5AQ12840 1032 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 PTP4A2Q12974 167 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 PDCLQ13371 301 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 C2CD6Q53TS8 623 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 STXBP5Q5T5C0 1151 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 MMS22LQ6ZRQ5 1243 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 MTSS1LQ765P7 747 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 MCOLN2Q8IZK6 566 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 OVCA2Q8WZ82 227 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 C11orf70Q9BRQ4 267 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 LIMD1Q9UGP4 676 aa22.33■■□□□ 1.17
R3HDM4-204ENST00000589428 A0A0C4DFX4 3053 aa22.32■■□□□ 1.16
R3HDM4-204ENST00000589428 TMEM253P0C7T8 217 aa22.32■■□□□ 1.16
R3HDM4-204ENST00000589428 PLA2G4AP47712 749 aa22.32■■□□□ 1.16
R3HDM4-204ENST00000589428 PTPN20Q4JDL3 420 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms