RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GH1P01241 217 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 IL2RAP01589 272 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 INSRRP14616 1297 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ZNF143P52747 638 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 EIF3EP60228 445 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 DYNLT1P63172 113 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 IGBP1P78318 339 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 OTUD4Q01804 1114 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 OGDHQ02218 1023 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SLC25A11Q02978 314 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TRIM32Q13049 653 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 BOLA3Q53S33 107 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ZC3H12AQ5D1E8 599 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 UBAP2Q5T6F2 1119 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 FAM102AQ5T9C2 384 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 JADE1Q6IE81 842 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CYB5D1Q6P9G0 228 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TRABD2AQ86V40 505 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 XYLT1Q86Y38 959 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 FBXO16Q8IX29 292 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 FUKQ8N0W3 1084 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 C1orf127Q8N9H9 656 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ZDHHC1Q8WTX9 485 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 HAUS1Q96CS2 278 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 MCRS1Q96EZ8 462 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CNPY3Q9BT09 278 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 NT5C1AQ9BXI3 368 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CALN1Q9BXU9 219 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TRABDQ9H4I3 376 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 RXFP1Q9HBX9 757 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CDV3Q9UKY7 258 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SLC12A4Q9UP95 1085 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 B4GALT5O43286 388 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CNMDO75829 334 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TOMM70O94826 608 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ZWINTO95229 277 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 C22orf31O95567 290 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ZSCAN5DPP0CG00 497 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CDH8P55286 799 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ACVR2BQ13705 512 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 PDK2Q15119 407 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 MTFR1Q15390 333 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TAZQ16635 292 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 HHATQ5VTY9 493 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 DARS2Q6PI48 645 aaKnown RBP7.73□□□□□ -1.17
ZNF540-206ENST00000589117 C4orf22Q6V702 233 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 C3orf62Q6ZUJ4 267 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SLC4A11Q8NBS3 891 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 PPTC7Q8NI37 304 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SPATA18Q8TC71 538 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 MAGEC3Q8TD91 643 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 LRRC8CQ8TDW0 803 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 FBF1Q8TES7 1133 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 TRAPPC12Q8WVT3 735 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 PWWP2AQ96N64 755 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CPXM1Q96SM3 734 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 PLEKHA5Q9HAU0 1116 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 VTA1Q9NP79 307 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SIX4Q9UIU6 781 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 AGAP1Q9UPQ3 857 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 STARD13Q9Y3M8 1113 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 CFAP69A5D8W1 941 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 C3orf70A6NLC5 250 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 GPR25O00155 361 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 STRNO43815 780 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PEX10O60683 326 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 DDNO94850 711 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 MICAL2O94851 1124 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TRUB2O95900 331 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PDGFAP04085 211 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 NFICP08651 508 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RBP3P10745 1247 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TCF4P15884 667 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PDGFRAP16234 1089 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 GPD1P21695 349 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CA4P22748 312 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 MIPP30301 263 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 MSH2P43246 934 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RASSF2P50749 326 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ROR1Q01973 937 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RNASELQ05823 741 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 SNAPC2Q13487 334 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 SMTNL2Q2TAL5 461 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 KCNT1Q5JUK3 1230 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RNF43Q68DV7 783 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ALKBH2Q6NS38 261 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 LCLAT1Q6UWP7 414 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 ZDHHC17Q8IUH5 632 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CYP4X1Q8N118 509 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 GPRC5AQ8NFJ5 357 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 HSPH1Q92598 858 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 PRCCQ92733 491 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 CYTH2Q99418 400 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
ZNF540-206ENST00000589117 RNPEPQ9H4A4 650 aa7.72□□□□□ -1.17
ZNF540-206ENST00000589117 DPP3Q9NY33 737 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms