RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 KATNAL2Q8IYT4 538 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 CENPIQ92674 756 aaPredicted RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 C11orf84Q9BUA3 381 aaPredicted RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 DDX56Q9NY93 547 aaKnown RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 PCDHA11Q9Y5I1 949 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 IRAK3Q9Y616 596 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 SSR1P43307 286 aaKnown RBP32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 RABGGTBP53611 331 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 TAS2R40P59535 323 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 ITIH3Q06033 890 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 SLC25A52Q3SY17 297 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 TNS4Q8IZW8 715 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 NT5C3BQ969T7 300 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 CAPZA3Q96KX2 299 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 CFAP57Q96MR6 1250 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 NAP1L3Q99457 506 aaPredicted RBP32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 CARD6Q9BX69 1037 aa32.47■■■□□ 2.79
CAPNS1-206ENST00000588815 YJEFN3A6XGL0 299 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 E7ENQ6 273 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 TUBB4BP68371 445 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 DDR2Q16832 855 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 SEL1L2Q5TEA6 688 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 DCAF12L1Q5VU92 463 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 DENND5BQ6ZUT9 1274 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 BHLHA9Q7RTU4 235 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 DEFB106AQ8N104 65 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 SEPT5Q99719 369 aaPredicted RBP32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 EHD2Q9NZN4 543 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 SCML2Q9UQR0 700 aa32.46■■■□□ 2.79
CAPNS1-206ENST00000588815 FAM92AA1XBS5 289 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 CEP104O60308 925 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 MARCKSL1P49006 195 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 TERF1P54274 439 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 ARHGAP18Q8N392 663 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 EXD1Q8NHP7 514 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 CRISPLD1Q9H336 500 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 TMEM51Q9NW97 253 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 SLC27A5Q9Y2P5 690 aa32.45■■■□□ 2.79
CAPNS1-206ENST00000588815 CTAGE15A4D2H0 777 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 PGRMC1O00264 195 aaKnown RBP32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 CAPN9O14815 690 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 CTAGE8P0CG41 777 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 SLC25A11Q02978 314 aaKnown RBP32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 DCAF6Q58WW2 860 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 TMC7Q7Z402 723 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 CTAGE6Q86UF2 777 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 CTAGE4Q8IX94 777 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 TTC9BQ8N6N2 239 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 ARFGAP1Q8N6T3 406 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 SCAMP5Q8TAC9 235 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 FAM172AQ8WUF8 416 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 USP18Q9UMW8 372 aa32.44■■■□□ 2.78
CAPNS1-206ENST00000588815 ENDOD1O94919 500 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 DNAJB2P25686 324 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 MIPP30301 263 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 CETN2P41208 172 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 C15orf59Q2T9L4 293 aaPredicted RBP32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 MON1AQ86VX9 555 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 MYRIPQ8NFW9 859 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 NDRG1Q92597 394 aaKnown RBP32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 RBM41Q96IZ5 413 aaKnown RBP32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 NPY6RQ99463 290 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 ABCC13Q9NSE7 274 aa32.43■■■□□ 2.78
CAPNS1-206ENST00000588815 ZRANB2O95218 330 aaKnown RBP eCLIP32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 DAB2IPQ5VWQ8 1189 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 TBCBQ99426 244 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 GDF15Q99988 308 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 UBE2OQ9C0C9 1292 aaKnown RBP32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 NGRNQ9NPE2 291 aaKnown RBP32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 CEP290O15078 2479 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 TEX28O15482 410 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 PRPSAP2O60256 369 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 YWHAQP27348 245 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 ELF1P32519 619 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 GPR15P49685 360 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 PSEN1P49768 467 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 COPS2P61201 443 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 ATP11AP98196 1134 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 CDO1Q16878 200 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 BOLA3Q53S33 107 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 BSPRYQ5W0U4 402 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 HFE2Q6ZVN8 426 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 BNIPLQ7Z465 357 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 TCEAL8Q8IYN2 117 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 RCOR2Q8IZ40 523 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 SPPL3Q8TCT6 385 aa32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 PGAP3Q96FM1 320 aaPredicted RBP32.42■■■□□ 2.78
CAPNS1-206ENST00000588815 CXCL14O95715 111 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 TRUB2O95900 331 aaKnown RBP32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 FYNP06241 537 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 ADH1AP07327 375 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 SULT1E1P49888 294 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 YWHAGP61981 247 aaKnown RBP eCLIP32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 SMC1AQ14683 1233 aaKnown RBP32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 TEKT4Q8WW24 435 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 AUTS2Q8WXX7 1259 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 TGS1Q96RS0 853 aaKnown RBP32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 C17orf80Q9BSJ5 609 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 TTLL2Q9BWV7 592 aa32.41■■■□□ 2.78
CAPNS1-206ENST00000588815 EMILIN2Q9BXX0 1053 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms