RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ANKRD52Q8NB46 1076 aa20.61■□□□□ 0.89
TPM4-208ENST00000588410 OTUB2Q96DC9 234 aa20.61■□□□□ 0.89
TPM4-208ENST00000588410 ZFRQ96KR1 1074 aaKnown RBP20.61■□□□□ 0.89
TPM4-208ENST00000588410 HESX1Q9UBX0 185 aa20.61■□□□□ 0.89
TPM4-208ENST00000588410 NAGPAQ9UK23 515 aa20.61■□□□□ 0.89
TPM4-208ENST00000588410 SLC8A2Q9UPR5 921 aa20.61■□□□□ 0.89
TPM4-208ENST00000588410 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.61■□□□□ 0.89
TPM4-208ENST00000588410 A0A1W2PQH9 124 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 CHURC1-FNTBB4DL54 471 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 RALAP11233 206 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 RARGP13631 454 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 FNTBP49356 437 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 PGFP49763 221 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 PSEN1P49768 467 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 GOLGA7BQ2TAP0 167 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 HEATR6Q6AI08 1181 aaKnown RBP20.6■□□□□ 0.89
TPM4-208ENST00000588410 CCDC186Q7Z3E2 898 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 PPM1KQ8N3J5 372 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 SUMF1Q8NBK3 374 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 RUBCNQ92622 972 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 SECISBP2LQ93073 1101 aaKnown RBP20.6■□□□□ 0.89
TPM4-208ENST00000588410 UBXN6Q9BZV1 441 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 CYLDQ9NQC7 956 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 RWDD2AQ9UIY3 292 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 RAB23Q9ULC3 237 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 KIAA1257Q9ULG3 409 aa20.6■□□□□ 0.89
TPM4-208ENST00000588410 K7ESF4 209 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 TBX18O95935 607 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 AFPP02771 609 aaKnown RBP20.59■□□□□ 0.89
TPM4-208ENST00000588410 KCNH2Q12809 1159 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 C10orf120Q5SQS8 335 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 PIGZQ86VD9 579 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 LONP2Q86WA8 852 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 TRIM59Q8IWR1 403 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 ARHGAP18Q8N392 663 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 CDK5RAP1Q96SZ6 601 aaKnown RBP20.59■□□□□ 0.89
TPM4-208ENST00000588410 EPC1Q9H2F5 836 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 NMUR1Q9HB89 426 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 C2orf42Q9NWW7 574 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 OSER1Q9NX31 292 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 NCDNQ9UBB6 729 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 DNMT3LQ9UJW3 386 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 LSM7Q9UK45 103 aaKnown RBP20.59■□□□□ 0.89
TPM4-208ENST00000588410 TSPAN16Q9UKR8 245 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 SMG5Q9UPR3 1016 aaKnown RBP20.59■□□□□ 0.89
TPM4-208ENST00000588410 PCDHB4Q9Y5E5 795 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 USP3Q9Y6I4 520 aa20.59■□□□□ 0.89
TPM4-208ENST00000588410 VDRP11473 427 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 ADH5P11766 374 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 OPRD1P41143 372 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 BCAT1P54687 386 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 MARSP56192 900 aaKnown RBP20.58■□□□□ 0.89
TPM4-208ENST00000588410 GAD2Q05329 585 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 BTBD8Q5XKL5 378 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 PKN3Q6P5Z2 889 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 RHBDF2Q6PJF5 856 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 TMEM270Q6UE05 265 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 BBS7Q8IWZ6 715 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 EHBP1Q8NDI1 1231 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 RPLP0P6Q8NHW5 317 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 ACDQ96AP0 544 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 KLF16Q9BXK1 252 aaPredicted RBP20.58■□□□□ 0.89
TPM4-208ENST00000588410 CLSTN2Q9H4D0 955 aa20.58■□□□□ 0.89
TPM4-208ENST00000588410 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.58■□□□□ 0.89
TPM4-208ENST00000588410 PTPRDP23468 1912 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 PAEPP09466 180 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 HOXA6P31267 233 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 CNR2P34972 360 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 PLA2G4AP47712 749 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 DMWDQ09019 674 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 LY6G5CQ5SRR4 150 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 KLHDC10Q6PID8 442 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 TTC30AQ86WT1 665 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 UBR7Q8N806 425 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 MLKLQ8NB16 471 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 PNKPQ96T60 521 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 LRRC4Q9HBW1 653 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 CLIC5Q9NZA1 410 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 NUDT5Q9UKK9 219 aa20.57■□□□□ 0.88
TPM4-208ENST00000588410 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 XPO1O14980 1071 aaKnown RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 EIF2DP41214 584 aaKnown RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 TKTL1P51854 596 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 SEC13P55735 322 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 PDE4CQ08493 712 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 BST2Q10589 180 aaKnown RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 PRR23BQ6ZRT6 265 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 HTR3DQ70Z44 454 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 RRAGAQ7L523 313 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 SCD5Q86SK9 330 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 LMO3Q8TAP4 145 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 INTS2Q9H0H0 1204 aaKnown RBP20.56■□□□□ 0.88
TPM4-208ENST00000588410 GMEB2Q9UKD1 530 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 OBSL1O75147 1896 aa20.56■□□□□ 0.88
TPM4-208ENST00000588410 MDM4O15151 490 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 APODP05090 189 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 SETSIPP0DME0 302 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 SLC6A11P48066 632 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms