RNA–Protein interactions for RNA: ENST00000587481.1

NUTF2-208, Transcript of nuclear transport factor 2, human

Gene NUTF2, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUTF2-208	ENST00000587481	MTIF2	P46199	727 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	GCLM	P48507	274 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	DSC1	Q08554	894 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	FXN	Q16595	210 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	RARS2	Q5T160	578 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	APTX	Q7Z2E3	356 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	C1orf127	Q8N9H9	656 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	CACTIN	Q8WUQ7	758 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	LRFN3	Q9BTN0	628 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	MARCH5	Q9NX47	278 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	XPO7	Q9UIA9	1087 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	UBQLN1	Q9UMX0	589 aa	Known RBP	10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481	DERA	Q9Y315	318 aa		10.36	□□□□□ -0.75
NUTF2-208	ENST00000587481		A0A1W2PRU2	124 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	PPEF2	O14830	753 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	ASGR2	P07307	311 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	TMEM191B	P0C7N4	346 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	RPL17	P18621	184 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	MPP1	Q00013	466 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	SURF1	Q15526	300 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CBWD6	Q4V339	395 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CBWD3	Q5JTY5	395 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	MIIP	Q5JXC2	388 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CBWD5	Q5RIA9	395 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	TDRD10	Q5VZ19	366 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	ANKRD54	Q6NXT1	300 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	TMC5	Q6UXY8	1006 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	BTN2A1	Q7KYR7	527 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	DDX53	Q86TM3	631 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	COLGALT2	Q8IYK4	626 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CARNMT1	Q8N4J0	409 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	SIX4	Q9UIU6	781 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CNP	P09543	421 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	KLRC2	P26717	231 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	ENPEP	Q07075	957 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	TUSC3	Q13454	348 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	KCNC3	Q14003	757 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	KIAA0319	Q5VV43	1072 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	C15orf39	Q6ZRI6	1047 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	SV2A	Q7L0J3	742 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	EDEM1	Q92611	657 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	CLIP3	Q96DZ5	547 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	C16orf45	Q96MC5	204 aa	Predicted RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	TUBGCP2	Q9BSJ2	902 aa		10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	SUCO	Q9UBS9	1254 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481	LIMA1	Q9UHB6	759 aa	Known RBP	10.35	□□□□□ -0.75
NUTF2-208	ENST00000587481		H3BRJ5	948 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	RASA4	O43374	803 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	LRRN2	O75325	713 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	RFPL1	O75677	317 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	C4BPA	P04003	597 aa	Known RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	CTSA	P10619	480 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	CDC25B	P30305	580 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	MXI1	P50539	228 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	MAN2A1	Q16706	1144 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	DUOXA2	Q1HG44	320 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	ZACN	Q401N2	412 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	USP37	Q86T82	979 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	PALB2	Q86YC2	1186 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	LSMEM1	Q8N8F7	131 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	BEST2	Q8NFU1	509 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	ANKRD36BP1	Q96IX9	119 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	GPR62	Q9BZJ7	368 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	S1PR5	Q9H228	398 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	SLC38A7	Q9NVC3	462 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	DPP3	Q9NY33	737 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	IFT80	Q9P2H3	777 aa	Predicted RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	KANSL3	Q9P2N6	904 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TDRD15	B5MCY1	1934 aa	Known RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	LRRC10B	A6NIK2	292 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481		B9A039	149 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	VNN1	O95497	513 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TNNC2	P02585	160 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	ITGB3	P05106	788 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TNNT1	P13805	278 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	SEPHS1	P49903	392 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	COPB1	P53618	953 aa	Known RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	KCNC4	Q03721	635 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TMEM31	Q5JXX7	168 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	SARM1	Q6SZW1	724 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TRAPPC11	Q7Z392	1133 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	CEP57	Q86XR8	500 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	LSM14A	Q8ND56	463 aa	Known RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	C3orf58	Q8NDZ4	430 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	N4BP2L2	Q92802	583 aa	Predicted RBP	10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	ELMO3	Q96BJ8	720 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	VPS16	Q9H269	839 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	TMEM8A	Q9HCN3	771 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	PCDHGB6	Q9Y5F9	930 aa		10.34	□□□□□ -0.75
NUTF2-208	ENST00000587481	MYO15A	Q9UKN7	3530 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	ANO9	A1A5B4	782 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	PI4K2B	G5E9Z4	385 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	PODXL	O00592	558 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	GPR39	O43194	453 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	AFP	P02771	609 aa	Known RBP	10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	CYP3A5	P20815	502 aa		10.33	□□□□□ -0.76
NUTF2-208	ENST00000587481	LRPAP1	P30533	357 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms