RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
SDF2-204ENST00000587338 DKK4Q9UBT3 224 aa9.12□□□□□ -0.95
SDF2-204ENST00000587338 ATMQ13315 3056 aa9.12□□□□□ -0.95
SDF2-204ENST00000587338 MGAQ8IWI9 3026 aa9.12□□□□□ -0.95
SDF2-204ENST00000587338 SPTA1P02549 2419 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 A0A087WV48 116 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 TRABD2BA6NFA1 517 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 TRIM24O15164 1050 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 OLFM2O95897 454 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 ATXN1LP0C7T5 689 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 ABCD1P33897 745 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ABCG1P45844 678 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 PPP3CCP48454 512 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 GTF2BQ00403 316 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 SOWAHAQ2M3V2 549 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ANO4Q32M45 955 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 PREPLQ4J6C6 727 aaPredicted RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 CCDC157Q569K6 752 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 SDE2Q6IQ49 451 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 FAM171BQ6P995 826 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 VSTM1Q6UX27 236 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 KIAA1324Q6UXG2 1013 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 NT5DC4Q86YG4 428 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 SCUBE3Q8IX30 993 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 TERB1Q8NA31 727 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 PIP4K2CQ8TBX8 421 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 KCNV2Q8TDN2 545 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 IPO4Q8TEX9 1081 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 CACTINQ8WUQ7 758 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 SLC39A7Q92504 469 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 SAAL1Q96ER3 474 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 FIZ1Q96SL8 496 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ACOX2Q99424 681 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 MIR1-1HGQ9H1L0 117 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 GAREM1Q9H706 876 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 GDAP2Q9NXN4 497 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 EHD2Q9NZN4 543 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 ITGA11Q9UKX5 1188 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 CFAP45Q9UL16 551 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 FNDC3AQ9Y2H6 1198 aaKnown RBP9.11□□□□□ -0.95
SDF2-204ENST00000587338 RAD54BQ9Y620 910 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 STYXL1Q9Y6J8 313 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 PTPRBP23467 1997 aa9.11□□□□□ -0.95
SDF2-204ENST00000587338 PTPRQQ9UMZ3 2332 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 A0A1B0GTW7 788 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 E2F8A0AVK6 867 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 FAM149AA5PLN7 773 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 F8VP50 259 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 HAX1O00165 279 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 GABRDO14764 452 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 TRIM66O15016 1216 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 HOXC11O43248 304 aaPredicted RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 CILPO75339 1184 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 C1QL1O75973 258 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 CER1O95813 267 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 PDGFRBP09619 1106 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 ADSSP30520 456 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 RBP5P82980 135 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 POU5F1Q01860 360 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 TAF10Q12962 218 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 MCM6Q14566 821 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 SF3A1Q15459 793 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 MAPRE1Q15691 268 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 GRAMD4Q6IC98 578 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 BRSK2Q8IWQ3 736 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 RASSF8Q8NHQ8 419 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 NOC3LQ8WTT2 800 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 KBTBD7Q8WVZ9 684 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 SPATA32Q96LK8 384 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 CEP295NLQ96MC4 621 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 SLITRK1Q96PX8 696 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 TTLL2Q9BWV7 592 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 MTMR12Q9C0I1 747 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 CRTAC1Q9NQ79 661 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 TM7SF3Q9NS93 570 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 TOR4AQ9NXH8 423 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 RBAKQ9NYW8 714 aaPredicted RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 KIAA1522Q9P206 1035 aaPredicted RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 CDH9Q9ULB4 789 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 SH3BP1Q9Y3L3 701 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 R3HCC1Q9Y3T6 440 aaKnown RBP9.1□□□□□ -0.95
SDF2-204ENST00000587338 CABIN1Q9Y6J0 2220 aa9.1□□□□□ -0.95
SDF2-204ENST00000587338 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 TMEM191BP0C7N4 346 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 IRF1P10914 325 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 PTMSP20962 102 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms