RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 SIX6OS1Q8N1H7 587 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 PKNOX2Q96KN3 472 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 SUSD3Q96L08 255 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 RTP3Q9BQQ7 232 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 SNRNP25Q9BV90 132 aaKnown RBP23.27■■□□□ 1.32
CIRBP-208ENST00000586548 GOLGA6AQ9NYA3 693 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 ZNF487B1APH4 448 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 FBXO21O94952 628 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 RARGP13631 454 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 PAN2Q504Q3 1202 aaKnown RBP23.26■■□□□ 1.31
CIRBP-208ENST00000586548 TTMPQ5BVD1 217 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 CLLU1OSQ5K130 101 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 CEP85LQ5SZL2 805 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 FAM126BQ8IXS8 530 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 URGCPQ8TCY9 931 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 EXOC4Q96A65 974 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 ARL8AQ96BM9 186 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 SMARCD1Q96GM5 515 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 SMOQ99835 787 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 MAK16Q9BXY0 300 aaKnown RBP23.26■■□□□ 1.31
CIRBP-208ENST00000586548 UNC93B1Q9H1C4 597 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 ANAPC5Q9UJX4 755 aa23.26■■□□□ 1.31
CIRBP-208ENST00000586548 COL6A1P12109 1028 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 TFE3P19532 575 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-208ENST00000586548 TYMPP19971 482 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 VPS41P49754 854 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 EIF3BP55884 814 aaKnown RBP23.25■■□□□ 1.31
CIRBP-208ENST00000586548 MMRN1Q13201 1228 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 NOMO2Q5JPE7 1267 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 INTS6LQ5JSJ4 861 aaKnown RBP23.25■■□□□ 1.31
CIRBP-208ENST00000586548 FAM171BQ6P995 826 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 EPB41L4BQ9H329 900 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 PCDH18Q9HCL0 1135 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 GOLGA6L10A6NI86 522 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 NUDT17P0C025 328 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 TKTL1P51854 596 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 YWHAZP63104 245 aaKnown RBP23.25■■□□□ 1.31
CIRBP-208ENST00000586548 DSC1Q08554 894 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 ZNF844Q08AG5 666 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 ERMARDQ5T6L9 678 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 IZUMO3Q5VZ72 239 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 FAM43BQ6ZT52 329 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-208ENST00000586548 DEFB106AQ8N104 65 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 HASPINQ8TF76 798 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 FAM149B1Q96BN6 582 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 RNF157Q96PX1 679 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 ADAM33Q9BZ11 813 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 PCDH9Q9HC56 1237 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 KANSL3Q9P2N6 904 aa23.25■■□□□ 1.31
CIRBP-208ENST00000586548 NDC80O14777 642 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 SLC25A52Q3SY17 297 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 ZC3H12AQ5D1E8 599 aaKnown RBP23.24■■□□□ 1.31
CIRBP-208ENST00000586548 RAB41Q5JT25 222 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 ZMIZ2Q8NF64 920 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 FAM76AQ8TAV0 307 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 MYLPFQ96A32 169 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 ZNF670Q9BS34 389 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 TMEM121Q9BTD3 319 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 TMBIM4Q9HC24 238 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 PAK6Q9NQU5 681 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-208ENST00000586548 GPATCH2LQ9NWQ4 482 aa23.24■■□□□ 1.31
CIRBP-208ENST00000586548 SAE1Q9UBE0 346 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-208ENST00000586548 TMEM189-UBE2V1I3L0A0 370 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 SGK1O00141 431 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 MCF2LO15068 1137 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 NOS2P35228 1153 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 DPYSL2Q16555 572 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 DENND2CQ68D51 928 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 OVOS1Q6IE37 1185 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 THEM5Q8N1Q8 247 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 OR2W6PQ8NHA6 318 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-208ENST00000586548 FAF2Q96CS3 445 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 SLC2A13Q96QE2 648 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 PKMYT1Q99640 499 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 FOXP3Q9BZS1 431 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 CSNK1G1Q9HCP0 422 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 CNGB3Q9NQW8 809 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 AAASQ9NRG9 546 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 TMEM161AQ9NX61 479 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 PSD3Q9NYI0 1048 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 PCDHB8Q9UN66 801 aa23.23■■□□□ 1.31
CIRBP-208ENST00000586548 DNALI1O14645 258 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 ITGB1P05556 798 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 MYZAPP0CAP1 466 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 PECAM1P16284 738 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 NDUFV1P49821 464 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 SULT1E1P49888 294 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 NOMO1Q15155 1222 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 MAPRE1Q15691 268 aaKnown RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 CA9Q16790 459 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 P3H1Q32P28 736 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 HIBCHQ6NVY1 386 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 TRMT10CQ7L0Y3 403 aaKnown RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 GLIS1Q8NBF1 620 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 NT5C3BQ969T7 300 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 SEMA4AQ9H3S1 761 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 ELAC1Q9H777 363 aaKnown RBP23.22■■□□□ 1.31
CIRBP-208ENST00000586548 STAP1Q9ULZ2 295 aa23.22■■□□□ 1.31
CIRBP-208ENST00000586548 PITPNM1O00562 1244 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms