RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LEFTY2O00292 366 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 TLR5O60602 858 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 RFX1P22670 979 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 BRD2P25440 801 aaKnown RBP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 ANO6Q4KMQ2 910 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 KLHDC7AQ5VTJ3 777 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 CC2D1AQ6P1N0 951 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 CCDC105Q8IYK2 499 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 FOXQ1Q9C009 403 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 AJAP1Q9UKB5 411 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
ERBB2-222ENST00000584908 SIT1Q9Y3P8 196 aa17.11■□□□□ 0.33
ERBB2-222ENST00000584908 A0A1W2PQH9 124 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 ZBED1O96006 694 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 MBL2P11226 248 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-222ENST00000584908 KRT5P13647 590 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 RPL34P49207 117 aaKnown RBP17.1■□□□□ 0.33
ERBB2-222ENST00000584908 TKTL1P51854 596 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 TNK2Q07912 1038 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 FZD5Q13467 585 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 RUNX3Q13761 415 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 EML3Q32P44 896 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
ERBB2-222ENST00000584908 UBA3Q8TBC4 463 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 ZNF606Q8WXB4 792 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 HSFY1Q96LI6 401 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 NAA15Q9BXJ9 866 aaKnown RBP17.1■□□□□ 0.33
ERBB2-222ENST00000584908 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
ERBB2-222ENST00000584908 OTOL1A6NHN0 477 aaPredicted RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 M0QYV0 167 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 STK25O00506 426 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 GABBR2O75899 941 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 CALCAP01258 141 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 CD72P21854 359 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 CTHP32929 405 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 GPD2P43304 727 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 MAGEA9P43362 315 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 RPS9P46781 194 aaKnown RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 ARHGAP44Q17R89 818 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 TRIM68Q6AZZ1 485 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 PMF1Q6P1K2 205 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 AOPEPQ8N6M6 819 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 FAM3CQ92520 227 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 ATP2A3Q93084 1043 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 CDK5RAP1Q96SZ6 601 aaKnown RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 VPS16Q9H269 839 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 CNGB3Q9NQW8 809 aa17.09■□□□□ 0.33
ERBB2-222ENST00000584908 DUS2Q9NX74 493 aaKnown RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 MTF2Q9Y483 593 aaPredicted RBP17.09■□□□□ 0.33
ERBB2-222ENST00000584908 E2F8A0AVK6 867 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 FAM170BA6NMN3 283 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 MED7O43513 233 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 GALR2O43603 387 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 TPM2P07951 284 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 RARGP13631 454 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 ARSAP15289 507 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 UCHL3P15374 230 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 GNA15P30679 374 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 ATP5C1P36542 298 aaKnown RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 KPNA1P52294 538 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 COPB1P53618 953 aaKnown RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 TADA2BQ86TJ2 420 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 STK32AQ8WU08 396 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 CHFRQ96EP1 664 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-222ENST00000584908 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 ECT2Q9H8V3 914 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 SMPD4Q9NXE4 827 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 CFAP97Q9P2B7 532 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 RAPGEFL1Q9UHV5 662 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 DAAM1Q9Y4D1 1078 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 CACNA1IQ9P0X4 2223 aa17.08■□□□□ 0.32
ERBB2-222ENST00000584908 LGALS16A8MUM7 142 aa17.07■□□□□ 0.32
ERBB2-222ENST00000584908 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-222ENST00000584908 SLC9A3R1O14745 358 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-222ENST00000584908 NCAM2O15394 837 aa17.07■□□□□ 0.32
ERBB2-222ENST00000584908 GREM1O60565 184 aa17.07■□□□□ 0.32
ERBB2-222ENST00000584908 TBX18O95935 607 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms