RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MDH1BQ5I0G3 518 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 FRMD1Q8N878 549 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 TXNDC5Q8NBS9 432 aaKnown RBP21.76■■□□□ 1.07
SRSF1-206ENST00000583741 KIAA0895Q8NCT3 520 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 FNBP1Q96RU3 617 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 BPIFA3Q9BQP9 254 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 MRPL45Q9BRJ2 306 aaKnown RBP21.76■■□□□ 1.07
SRSF1-206ENST00000583741 TMEM121BQ9BXQ6 578 aaPredicted RBP21.76■■□□□ 1.07
SRSF1-206ENST00000583741 ZDHHC4Q9NPG8 344 aa21.76■■□□□ 1.07
SRSF1-206ENST00000583741 TRIM66O15016 1216 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 KLF8O95600 359 aaPredicted RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 OAS1P00973 400 aaKnown RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CEACAM1P13688 526 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CD44P16070 742 aaKnown RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CSRP1P21291 193 aaKnown RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 TIE1P35590 1138 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 STIM1Q13586 685 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 DUOXA2Q1HG44 320 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CT47A1Q5JQC4 288 aaPredicted RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 EMC10Q5UCC4 262 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 RHBDF2Q6PJF5 856 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 C8orf48Q96LL4 319 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 MMS19Q96T76 1030 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CBX8Q9HC52 389 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 BAHCC1Q9P281 2608 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 CFAP97Q9P2B7 532 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 ZMIZ1Q9ULJ6 1067 aa21.75■■□□□ 1.07
SRSF1-206ENST00000583741 DSPP15924 2871 aaKnown RBP21.75■■□□□ 1.07
SRSF1-206ENST00000583741 FREM2Q5SZK8 3169 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 ZNF233A6NK53 670 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 PPP1R3GB7ZBB8 358 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 KIAA0391O15091 583 aaKnown RBP21.74■■□□□ 1.07
SRSF1-206ENST00000583741 KAT7O95251 611 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 ABL1P00519 1130 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 HOXD13P35453 343 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 P2RY2P41231 377 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 PPP1R2P41236 205 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 PRCPP42785 496 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 TAF10Q12962 218 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 UAP1L1Q3KQV9 507 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 COBLL1Q53SF7 1204 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 KLHL10Q6JEL2 608 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 ARMCX6Q7L4S7 300 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 WDR49Q8IV35 697 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 KIAA1958Q8N8K9 716 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 PNKPQ96T60 521 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 DPEP3Q9H4B8 488 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 HSPBP1Q9NZL4 362 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 MBD1Q9UIS9 605 aaPredicted RBP21.74■■□□□ 1.07
SRSF1-206ENST00000583741 MAPK8IP1Q9UQF2 711 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 CEP192Q8TEP8 1941 aa21.74■■□□□ 1.07
SRSF1-206ENST00000583741 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 ALDH1A2O94788 518 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 ERCC5P28715 1186 aaPredicted RBP21.73■■□□□ 1.07
SRSF1-206ENST00000583741 PTGER3P43115 390 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 KIR2DL1P43626 348 aaPredicted RBP21.73■■□□□ 1.07
SRSF1-206ENST00000583741 PPP3CCP48454 512 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 KDSRQ06136 332 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 TRIM61Q5EBN2 209 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 HS2ST1Q7LGA3 356 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 TRAPPC11Q7Z392 1133 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 TMEFF1Q8IYR6 380 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 DEFB124Q8NES8 71 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 WHAMMQ8TF30 809 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 ADAM33Q9BZ11 813 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 TMEM74BQ9NUR3 256 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 EHD2Q9NZN4 543 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 EVLQ9UI08 416 aaPredicted RBP21.73■■□□□ 1.07
SRSF1-206ENST00000583741 ADAMTS9Q9P2N4 1935 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 PCNX2A6NKB5 2137 aa21.73■■□□□ 1.07
SRSF1-206ENST00000583741 SLC9A3R1O14745 358 aaPredicted RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 ADAM23O75077 832 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 CST3P01034 146 aaPredicted RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 GNL1P36915 607 aaPredicted RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 EIF2DP41214 584 aaKnown RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 IQCB1Q15051 598 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 SURF1Q15526 300 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 LUZP1Q86V48 1076 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 AOPEPQ8N6M6 819 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 KDF1Q8NAX2 398 aaPredicted RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 ZNF518BQ9C0D4 1074 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 ARHGEF4Q9NR80 690 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 CTNND2Q9UQB3 1225 aa21.72■■□□□ 1.07
SRSF1-206ENST00000583741 ATXN2Q99700 1313 aaKnown RBP21.72■■□□□ 1.07
SRSF1-206ENST00000583741 A0A0A0MRY4 1105 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 BECN2A8MW95 431 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 TNFRSF10BO14763 440 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 PSMA7O14818 248 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 TACC1O75410 805 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 APODP05090 189 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 MBL2P11226 248 aaPredicted RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 ADH5P11766 374 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 IFRD2Q12894 506 aaPredicted RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 LPCAT2Q7L5N7 544 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 PHTF2Q8N3S3 785 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 GUF1Q8N442 669 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 HMGB4Q8WW32 186 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 ZFRQ96KR1 1074 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 SCNM1Q9BWG6 230 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 SNX25Q9H3E2 840 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms