RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ZNF512Q96ME7 567 aaPredicted RBP10.01□□□□□ -0.81
RFFL-210ENST00000582308 NMUR1Q9HB89 426 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 IL21Q9HBE4 155 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 PARVAQ9NVD7 372 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 DZANK1Q9NVP4 752 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 HCFC1R1Q9NWW0 138 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 MTMR10Q9NXD2 777 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 ZDHHC7Q9NXF8 308 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 GMIPQ9P107 970 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 WDR35Q9P2L0 1181 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 STRIP2Q9ULQ0 834 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 PPP2R2CQ9Y2T4 447 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 DUSP10Q9Y6W6 482 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 EYSQ5T1H1 3165 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
RFFL-210ENST00000582308 HELZP42694 1942 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 A0A1W2PQH9 124 aa10□□□□□ -0.81
RFFL-210ENST00000582308 XYLBO75191 536 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TBX10O75333 385 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TADA3O75528 432 aa10□□□□□ -0.81
RFFL-210ENST00000582308 GRAP2O75791 330 aa10□□□□□ -0.81
RFFL-210ENST00000582308 F11P03951 625 aa10□□□□□ -0.81
RFFL-210ENST00000582308 FYNP06241 537 aa10□□□□□ -0.81
RFFL-210ENST00000582308 POU2F2P09086 479 aa10□□□□□ -0.81
RFFL-210ENST00000582308 ZDHHC11BP0C7U3 371 aa10□□□□□ -0.81
RFFL-210ENST00000582308 LTBRP36941 435 aa10□□□□□ -0.81
RFFL-210ENST00000582308 SCNN1AP37088 669 aa10□□□□□ -0.81
RFFL-210ENST00000582308 ARHGAP25P42331 645 aa10□□□□□ -0.81
RFFL-210ENST00000582308 EPHA5P54756 1037 aa10□□□□□ -0.81
RFFL-210ENST00000582308 RNASE9P60153 205 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 RPL7AP62424 266 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 DLX2Q07687 328 aaPredicted RBP10□□□□□ -0.81
RFFL-210ENST00000582308 TCEAL1Q15170 157 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TAF12Q16514 161 aa10□□□□□ -0.81
RFFL-210ENST00000582308 EFHC1Q5JVL4 640 aa10□□□□□ -0.81
RFFL-210ENST00000582308 RARS2Q5T160 578 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 FAM102AQ5T9C2 384 aaPredicted RBP10□□□□□ -0.81
RFFL-210ENST00000582308 BSPRYQ5W0U4 402 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TRNP1Q6NT89 227 aa10□□□□□ -0.81
RFFL-210ENST00000582308 ANKRD54Q6NXT1 300 aa10□□□□□ -0.81
RFFL-210ENST00000582308 DNAJC24Q6P3W2 148 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TMC5Q6UXY8 1006 aa10□□□□□ -0.81
RFFL-210ENST00000582308 GAREM2Q75VX8 874 aa10□□□□□ -0.81
RFFL-210ENST00000582308 SLC26A9Q7LBE3 791 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TMEM150AQ86TG1 271 aa10□□□□□ -0.81
RFFL-210ENST00000582308 MON1AQ86VX9 555 aa10□□□□□ -0.81
RFFL-210ENST00000582308 ELMOD1Q8N336 334 aa10□□□□□ -0.81
RFFL-210ENST00000582308 MICALL1Q8N3F8 863 aa10□□□□□ -0.81
RFFL-210ENST00000582308 CMASQ8NFW8 434 aaPredicted RBP10□□□□□ -0.81
RFFL-210ENST00000582308 JOSD2Q8TAC2 188 aa10□□□□□ -0.81
RFFL-210ENST00000582308 SLC35G2Q8TBE7 412 aa10□□□□□ -0.81
RFFL-210ENST00000582308 CORO1BQ9BR76 489 aa10□□□□□ -0.81
RFFL-210ENST00000582308 NUP85Q9BW27 656 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TRIM7Q9C029 511 aa10□□□□□ -0.81
RFFL-210ENST00000582308 SFXN1Q9H9B4 322 aa10□□□□□ -0.81
RFFL-210ENST00000582308 LUC7LQ9NQ29 371 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 METTL5Q9NRN9 209 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 OSER1Q9NX31 292 aa10□□□□□ -0.81
RFFL-210ENST00000582308 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 CLEC1BQ9P126 229 aa10□□□□□ -0.81
RFFL-210ENST00000582308 DNMT3BQ9UBC3 853 aaKnown RBP10□□□□□ -0.81
RFFL-210ENST00000582308 TRIM10Q9UDY6 481 aa10□□□□□ -0.81
RFFL-210ENST00000582308 SALL4Q9UJQ4 1053 aa10□□□□□ -0.81
RFFL-210ENST00000582308 TMEM59LQ9UK28 342 aa10□□□□□ -0.81
RFFL-210ENST00000582308 COG5Q9UP83 839 aa10□□□□□ -0.81
RFFL-210ENST00000582308 ZNF840PA6NDX5 716 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 TMEM191CA6NGB0 347 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 BTNL10A8MVZ5 291 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SART1O43290 800 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 NCK2O43639 380 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 HSF2BPO75031 334 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 LTFP02788 710 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 GLI1P08151 1106 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 KRT3P12035 628 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 HOXB8P17481 243 aaPredicted RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 PTPN2P17706 415 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 RFC1P35251 1148 aaPredicted RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 FLT3P36888 993 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 CCR2P41597 374 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 YWHAGP61981 247 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFFL-210ENST00000582308 YWHAZP63104 245 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 NTHL1P78549 312 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SNX30Q5VWJ9 437 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SYPL2Q5VXT5 272 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 ZNF662Q6ZS27 426 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 GRASPQ7Z6J2 395 aaPredicted RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 GPR149Q86SP6 731 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 REXO1L1PQ8IX06 675 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 EMC1Q8N766 993 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SMG7Q92540 1137 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 FAM149B1Q96BN6 582 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 PABPC5Q96DU9 382 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 TCEAL4Q96EI5 215 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SLITRK1Q96PX8 696 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SLC2A13Q96QE2 648 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SELENOOQ9BVL4 669 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms