RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 NCAM1P13591 858 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 HLA-EP13747 358 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 PLCG1P19174 1290 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 EIF2S3P41091 472 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 PRPHP41219 470 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 PPP3CCP48454 512 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 TAF10Q12962 218 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 GRAMD4Q6IC98 578 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 SLFN12LQ6IEE8 588 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 IL27RAQ6UWB1 636 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 DHRS13Q6UX07 377 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 LRRC69Q6ZNQ3 347 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 TMEM25Q86YD3 366 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 LRRC52Q8N7C0 313 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 OTUB2Q96DC9 234 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 TOE1Q96GM8 510 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 CDK5RAP3Q96JB5 506 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 FAM84AQ96KN4 292 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 GABRG3Q99928 467 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 IKZF4Q9H2S9 585 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 CRTAC1Q9NQ79 661 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 SPHK2Q9NRA0 654 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 GDAP2Q9NXN4 497 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 NFE2L3Q9Y4A8 694 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 STYXL1Q9Y6J8 313 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 TMEM131Q92545 1883 aa13.4□□□□□ -0.26
CSNK1D-218ENST00000581655 F8VP50 259 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 LAD1O00515 517 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 BCAT2O15382 392 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 TNFSF14O43557 240 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 TLX3O43711 291 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 LMO2P25791 158 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 ZNF131P52739 623 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 GTF2BQ00403 316 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 CFHR1Q03591 330 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 PTPRNQ16849 979 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 SOWAHAQ2M3V2 549 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 BBS7Q8IWZ6 715 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 KCTD17Q8N5Z5 321 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 CSGALNACT2Q8N6G5 542 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 ZFRQ96KR1 1074 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 FIZ1Q96SL8 496 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 DNAJC17Q9NVM6 304 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 SH3BP1Q9Y3L3 701 aa13.39□□□□□ -0.27
CSNK1D-218ENST00000581655 A0A1B0GVT2 93 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 PRRT4C9JH25 899 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 TRIM66O15016 1216 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 COCHO43405 550 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 KRT19P08727 400 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 SEMG2Q02383 582 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 NUMA1Q14980 2115 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 TMEM119Q4V9L6 283 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 POMGNT1Q8WZA1 660 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 NXPE2Q96DL1 559 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 EIF2B4Q9UI10 523 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 CDH9Q9ULB4 789 aa13.38□□□□□ -0.27
CSNK1D-218ENST00000581655 WASH3PC4AMC7 463 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 RRP8O43159 456 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 ADSSP30520 456 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 ABCD1P33897 745 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 PCSK4Q6UW60 755 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 GPR155Q7Z3F1 870 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 BRSK2Q8IWQ3 736 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 WBP2Q969T9 261 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 C8orf48Q96LL4 319 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 GMIPQ9P107 970 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 ITGA11Q9UKX5 1188 aa13.37□□□□□ -0.27
CSNK1D-218ENST00000581655 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms