RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SKOR1P84550 965 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 CSTF1Q05048 431 aaKnown RBP10.28□□□□□ -0.76
TOP3A-211ENST00000581536 INCA1Q0VD86 236 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 LRMPQ12912 555 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 NR6A1Q15406 480 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 ZNF77Q15935 545 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 ITPRIPL2Q3MIP1 535 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-211ENST00000581536 TTI2Q6NXR4 508 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 GPRIN1Q7Z2K8 1008 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 UNC93AQ86WB7 457 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 SH3RF2Q8TEC5 729 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 WBP2Q969T9 261 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 JAKMIP2Q96AA8 810 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 HEXIM2Q96MH2 286 aaKnown RBP10.28□□□□□ -0.76
TOP3A-211ENST00000581536 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 CYP3A43Q9HB55 503 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 CSNK1G1Q9HCP0 422 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 KRT82Q9NSB4 513 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 POLR3BQ9NW08 1133 aaPredicted RBP10.28□□□□□ -0.76
TOP3A-211ENST00000581536 THG1LQ9NWX6 298 aaKnown RBP10.28□□□□□ -0.76
TOP3A-211ENST00000581536 IL37Q9NZH6 218 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 CTNND2Q9UQB3 1225 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 WNT6Q9Y6F9 365 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 EML5Q05BV3 1969 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 HHLA1C9JL84 531 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 LEFTY2O00292 366 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 PSMA7O14818 248 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 NCAM2O15394 837 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CILPO75339 1184 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CALCAP01258 141 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 RAD23BP54727 409 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 MLLT6P55198 1093 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 UBE2HP62256 183 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 LRRC63Q05C16 580 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 FOXC1Q12948 553 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 ZNF268Q14587 947 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 MTF1Q14872 753 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CLEC20AQ6ZU45 233 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 RALGPS2Q86X27 583 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 SLC4A11Q8NBS3 891 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 FBXO32Q969P5 355 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 SMARCD1Q96GM5 515 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 MED15Q96RN5 788 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 HNRNPABQ99729 332 aaKnown RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 NT5C1AQ9BXI3 368 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 SRRTQ9BXP5 876 aaKnown RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 NIF3L1Q9GZT8 377 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 C8orf33Q9H7E9 229 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CCSER2Q9H7U1 834 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 OSER1Q9NX31 292 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 DUS2Q9NX74 493 aaKnown RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 SMPD4Q9NXE4 827 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 GMIPQ9P107 970 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 ARMCX3Q9UH62 379 aaPredicted RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 FKBPLQ9UIM3 349 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 ZMYM5Q9UJ78 669 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 MRPS17Q9Y2R5 130 aaKnown RBP10.27□□□□□ -0.77
TOP3A-211ENST00000581536 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
TOP3A-211ENST00000581536 RALGAPA1Q6GYQ0 2036 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 KIAA1549LQ6ZVL6 1849 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 RNF225M0QZC1 329 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 SLC16A3O15427 465 aaKnown RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 COCHO43405 550 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 LAMTOR5O43504 91 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 STX10O60499 249 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 RTN3O95197 1032 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 TBX18O95935 607 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 GJA4P35212 333 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 RPS9P46781 194 aaKnown RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 FMO5P49326 533 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 SLC5A3P53794 718 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 SLC7A9P82251 487 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 STIM1Q13586 685 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 EML3Q32P44 896 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 CCDC40Q4G0X9 1142 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 CC2D1AQ6P1N0 951 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 PKN3Q6P5Z2 889 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 Q6ZS52 159 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 ADGRG2Q8IZP9 1017 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 LMO3Q8TAP4 145 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 OSCP1Q8WVF1 389 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 TMEM176AQ96HP8 235 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 SLITRK1Q96PX8 696 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 IMPG2Q9BZV3 1241 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 ECT2Q9H8V3 914 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 NMUR1Q9HB89 426 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 DMAP1Q9NPF5 467 aaPredicted RBP10.26□□□□□ -0.77
TOP3A-211ENST00000581536 NUDT5Q9UKK9 219 aa10.26□□□□□ -0.77
TOP3A-211ENST00000581536 ARHGAP26Q9UNA1 814 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms