RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 USP17L6PQ6QN14 398 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 GRASPQ7Z6J2 395 aaPredicted RBP5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 TOR1AIP2Q8NFQ8 470 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 SSH3Q8TE77 659 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 ATRIPQ8WXE1 791 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 ATG4AQ8WYN0 398 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 CCT6BQ92526 530 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 KLK15Q9H2R5 256 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 IL17RBQ9NRM6 502 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 LRFN1Q9P244 771 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 POLR2AP24928 1970 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 FER1L4A9Z1Z3 1794 aa5.52□□□□□ -1.53
SMCHD1-205ENST00000581383 NPC1O15118 1278 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 YY2O15391 372 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 CD3EAPO15446 510 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 PECAM1P16284 738 aaPredicted RBP5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 EGR1P18146 543 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 YY1P25490 414 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 NTSR1P30989 418 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 UQCRC1P31930 480 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 ABCG1P45844 678 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 PDE6CP51160 858 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 PGDP52209 483 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 EIF2B5Q13144 721 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 MAPKAPK3Q16644 382 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 LY6KQ17RY6 165 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 CERCAMQ5T4B2 595 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 TMTC4Q5T4D3 741 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 MRNIPQ6NTE8 343 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 ABRAQ8N0Z2 381 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 MYCBPAPQ8TBZ2 947 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 OSCP1Q8WVF1 389 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 FUBP1Q96AE4 644 aaKnown RBP5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 C17orf80Q9BSJ5 609 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 SLC25A32Q9H2D1 315 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 PRDM13Q9H4Q3 707 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 DNAJB11Q9UBS4 358 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 SNX14Q9Y5W7 946 aa5.51□□□□□ -1.53
SMCHD1-205ENST00000581383 CCDC151A5D8V7 595 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 CREB3O43889 395 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 RHOP08100 348 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 SRGNP10124 158 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 GATMP50440 423 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 BCAT1P54687 386 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 FAM153CQ494X1 144 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 TLDC1Q6P9B6 456 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 IZUMO1Q8IYV9 350 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 LNX2Q8N448 690 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 NKAPQ8N5F7 415 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 LTV1Q96GA3 475 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 FAM227BQ96M60 508 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 HIST1H2AAQ96QV6 131 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 RMDN3Q96TC7 470 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 SEMA4GQ9NTN9 838 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 DACT1Q9NYF0 836 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 TMOD4Q9NZQ9 345 aa5.5□□□□□ -1.53
SMCHD1-205ENST00000581383 ADM5C9JUS6 153 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 AGPSO00116 658 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 USP1O94782 785 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 TNFRSF6BO95407 300 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 VNN1O95497 513 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 GPD1P21695 349 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 MST1P26927 711 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 FOLR3P41439 243 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 GRK6P43250 576 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 ITIH3Q06033 890 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 SRSF4Q08170 494 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 PTK2BQ14289 1009 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 TBCCQ15814 346 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 TSTD2Q5T7W7 516 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 SLC9A4Q6AI14 798 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 VWA1Q6PCB0 445 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 KRT73Q86Y46 540 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 CACNA2D3Q8IZS8 1091 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 MYRIPQ8NFW9 859 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 STYXQ8WUJ0 223 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 TFAP2BQ92481 460 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 GLG1Q92896 1179 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 SCLT1Q96NL6 688 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 PRPF18Q99633 342 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 MYLK2Q9H1R3 596 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 MAGEH1Q9H213 219 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 EPS8L2Q9H6S3 715 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 DKK3Q9UBP4 350 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 GRHPRQ9UBQ7 328 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 SCAF8Q9UPN6 1271 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 USP22Q9UPT9 525 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 PCDHGB3Q9Y5G1 929 aa5.49□□□□□ -1.53
SMCHD1-205ENST00000581383 A1L4Q6 167 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 TRIM38O00635 465 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 MGST3O14880 152 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 CCNT2O60583 730 aaKnown RBP5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 SNX2O60749 519 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 SRGAP2BP0DMP2 458 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 ARP10275 920 aa5.48□□□□□ -1.53
SMCHD1-205ENST00000581383 EPHA3P29320 983 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms