RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CES2O00748 559 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 KCNQ3O43525 872 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 COQ9O75208 318 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 PDE8BO95263 885 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 CD19P15391 556 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 ABCB4P21439 1286 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 EEF1GP26641 437 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 BTKQ06187 659 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 FAXCQ5TGI0 409 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 XRRA1Q6P2D8 792 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 FBXO38Q6PIJ6 1188 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 USP17L6PQ6QN14 398 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 USP49Q70CQ1 688 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 MORC1Q86VD1 984 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 SKAP1Q86WV1 359 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 ADGRG3Q86Y34 549 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 FAM98AQ8NCA5 519 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 KIAA1191Q96A73 305 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 SARAFQ96BY9 339 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 ZDHHC12Q96GR4 267 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 BBC3Q96PG8 261 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 LENG8Q96PV6 779 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 SELENOOQ9BVL4 669 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 R3HDMLQ9H3Y0 253 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 TRIM36Q9NQ86 728 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 ARPP21Q9UBL0 812 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 VPS51Q9UID3 782 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 AMFRQ9UKV5 643 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 SLC27A6Q9Y2P4 619 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 WNT6Q9Y6F9 365 aa5.4□□□□□ -1.54
SMCHD1-204ENST00000581226 FAM234BA2RU67 622 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 ZNF213O14771 459 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 CCNT2O60583 730 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 C1QL1O75973 258 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 CREB1P16220 341 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 GABRB3P28472 473 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 RBL1P28749 1068 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 SERPINB3P29508 390 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 HSPA7P48741 367 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 MPEG1Q2M385 716 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 DGKKQ5KSL6 1271 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 KIAA0408Q6ZU52 694 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 RD3Q7Z3Z2 195 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 DNAJC10Q8IXB1 793 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 METTL25Q8N6Q8 603 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 GLIS1Q8NBF1 620 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 ZNF384Q8TF68 577 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 NELL1Q92832 810 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.39□□□□□ -1.552e-14■■□□□ 13.5
SMCHD1-204ENST00000581226 PCDHAC1Q9H158 963 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 SLC52A1Q9NWF4 448 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 RGL1Q9NZL6 768 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 SH3BP4Q9P0V3 963 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 STEAP1Q9UHE8 339 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 RIMKLBQ9ULI2 386 aa5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 ZMYND8Q9ULU4 1186 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-204ENST00000581226 M0R3H8 397 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 OVOL3O00110 214 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 PODXLO00592 558 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 SPRY2O43597 315 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 JTBO76095 146 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 FGAP02671 866 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 HTR3AP46098 478 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 CYP4F2P78329 520 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 GPS1Q13098 491 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 GRM1Q13255 1194 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 RAP1GAP2Q684P5 730 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MRNIPQ6NTE8 343 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 TOGARAM2Q6ZUX3 1019 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 PTCHD4Q6ZW05 846 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 CCDC28AQ8IWP9 274 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 SYTL1Q8IYJ3 562 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MBD3L2Q8NHZ7 208 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 ABHD5Q8WTS1 349 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 CTHRC1Q96CG8 243 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 GDF15Q99988 308 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MACROD1Q9BQ69 325 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 THAP7Q9BT49 309 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 ARFGAP3Q9NP61 516 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 MGAT4CQ9UBM8 478 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 LPAR3Q9UBY5 353 aa5.38□□□□□ -1.55
SMCHD1-204ENST00000581226 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 HNRNPDLO14979 420 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 EXOC3O60645 756 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 PPFIA2O75334 1257 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 PROP1O75360 226 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 SETSIPP0DME0 302 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 ARP10275 920 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 FPR3P25089 353 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 NANOS3P60323 173 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 HOXA4Q00056 320 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 PSG6Q00889 435 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 CLCA4Q14CN2 919 aa5.37□□□□□ -1.55
SMCHD1-204ENST00000581226 ST3GAL2Q16842 350 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms